Pangasianodon hypophthalmus (striped catfish): 113541502
Help
Entry
113541502 CDS
T05759
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04068
FoxO signaling pathway
phyp04110
Cell cycle
phyp04120
Ubiquitin mediated proteolysis
phyp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113541502 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
113541502 (skp2)
04150 mTOR signaling pathway
113541502 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
113541502 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113541502 (skp2)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
113541502 (skp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_6
LRR_At5g56370
LRR_NXF1-5
LRR_R13L1-DRL21
LRR_4
LRR_8
LRR_FBXL18
LRR_Zer-1
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
113541502
NCBI-ProteinID:
XP_026794291
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAAERPLQELPCLSENLDGSLLCMSQSKAKKRPCVYGDGLHAENTPHELIQHWSPPRKQP
RPCAKGKENGFVLARRPRRSRDTAGVLCWDTLPDELLLGIFSCLSLQDLLRTSRVCKRWH
RLAXXXXLWHSADLVGRAQLNGELGQVLTAGVSRLRCPHSCIGEPCFKNTQLLRVQHLDL
SSCTVQTSVLEDVLSRCRRLQNLSVEGLVLSDSILRSLSENTELVRLNLCGCTGFSADSL
TEMLQSCTKLEELNVSWCDFSSEHVQAVVNNVPSTVTQLNISGYRQNFTMDDLKVLVERC
PNLTHLDLSDSVLVTTDSFPFLQQLSSLRHLALSRCYQIHPAALIEFEKFVTLQTLEVFG
LIQDSSLPILSKGLPRIQINTHPFSGVARPTAATRKDRTLWGMHCRLVYKP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgagaggcctctccaggagctgccgtgtctgagtgagaatctcgatggctcc
ctgctgtgcatgtcgcaatccaaagcgaagaaaaggccgtgtgtgtatggagacggactg
cacgctgaaaacactcctcacgagcttatccagcactggtctcctccccgtaaacagccg
cggccctgcgccaagggcaaagagaacggctttgtcctcgccagacgccccaggaggagc
agagacacagcgggtgttctgtgttgggacactctcccagacgagctgctgttggggatt
ttctcgtgtctctcactgcaagaccttctcaggacgtcccgcgtctgcaagcgctggcat
cgactagcnnnnnnnnnnncactgtggcacagcgctgacctggtaggaagagcacagctg
aatggcgagctgggtcaggtgctcacagcgggggtgtcgaggctgcgctgtccacactcc
tgcatcggcgaaccctgctttaagaacacacagctcctacgtgtccagcatttggacctg
tccagctgcactgtgcagacgtctgtgctggaggacgtcctgtcgcgctgcagacggctg
cagaacctcagcgtggagggactcgtgctctctgactccatcctccgatctttgagtgag
aacacagagctggtgcggctgaacctgtgcggctgtactggtttctctgctgactctctg
actgagatgcttcaatcctgcaccaagcttgaggagctgaatgtgtcgtggtgtgacttc
agcagtgaacatgttcaggctgtcgttaacaatgtcccctccaccgtcactcagctcaac
atcagcggctacagacaaaactttaccatggatgatttaaaggttttggtggaaagatgt
ccgaatcttacgcatttggatttgagtgacagcgtccttgtgaccacagacagtttcccc
ttcctgcagcagctctcctcactgagacatttagcgctgagccgctgctaccagattcac
ccagccgccctcatagagtttgagaagtttgtgactctgcagaccctggaggtgtttggt
ctgatacaggacagctccctgcccatcctgagtaaagggttgccacggatacagatcaac
acccatccgttctcaggcgtggctcgtcccactgcggccacacggaaagaccgcacgctg
tggggaatgcactgtcgactggtgtataaaccctaa
DBGET
integrated database retrieval system
