Pangasianodon hypophthalmus (striped catfish): 113541524
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Entry
113541524 CDS
T05759
Name
(RefSeq) hepatocyte nuclear factor 1-beta-B-like isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113541524
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
113541524
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
HNF-1B_C
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
113541524
NCBI-ProteinID:
XP_026794336
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MFADMVSQLTSLQQELLSALLDSGLTKDELVQALHDLEPRPSDFAIKTEKPLSPASANGA
SDTDSKPVYMTLQARGSKVSGDEGSESGEDFDTPPILRELQALNTEEANEQRAMVERMLA
EDPWRAARTIKSYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTTKRASLYAWYAQK
QREIDRQFDRVQGSSDSGSQDQVLFFFPEFHNGGQNAGSASGTLADEGVTGSKRMRRNRF
KWGPASQEILYKAYERQKNPSKEEREALVEECNRAECVQRGVSPSKAHGLGSNLVTEVRV
YNWFANRRKEEAFRQKLAMDTYPVHSLNPLLPPPHSQHHHSSPDTKLRYSQQGSGDVTSS
TSIGHHGNSQSVLQQVSPPGLDPCHSLLSPEAKMHVQISASGGVLPPVSTLTNIHSLSQS
SHHHQQAQSLIMTLAAQSLSAPPSQNVPIINSVSGLTALQPMQFPHSPSLTPLTTAHTTQ
QAYTHMYSPKQEPPQYSHPSRFSSMDTSAISHLGSSKQCPLQAW
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgacatggtgtcgcagttgacgtctcttcagcaggagttactgagcgccttg
ttggactcgggactgaccaaggatgagctcgtccaggcgctgcatgatctagagccgcgt
ccgtccgacttcgccatcaaaaccgagaagcccttatccccagccagcgctaacggtgcc
agcgacacggactccaagccggtatatatgaccctgcaagccagagggagtaaagtgtcc
ggggatgaaggctcagagtccggggaggacttcgacacgccgcccatcctgagagaactg
caggcgctaaacaccgaggaggctaacgagcagcgcgccatggtggagcgcatgctggct
gaggatccgtggcgtgcagctcgcactattaaaagctacatgcaacagcacaacattcct
cagcgcgaggtggtggacgtgacaggattgaatcagtctcacctctcgcagcacctgaac
aaaggaacacccatgaaaacaaccaaacgagcctcgctgtacgcctggtatgcccagaaa
cagcgagagattgaccggcagtttgaccgtgttcagggctccagtgactcaggcagtcag
gatcaggtcctgttttttttcccagaattccacaacggggggcagaatgcaggctccgcg
tcagggacgctcgcagacgaaggcgtgacaggttcaaaaagaatgaggcggaaccgcttc
aaatggggaccggcgtctcaggagatcttgtacaaggcctatgagaggcagaagaacccc
agcaaagaggagagagaagcgctggtggaggaatgcaacagggctgagtgtgtacagagg
ggtgtgtcaccttctaaagctcacggtctcggctctaacctggtcacagaagttcgcgtc
tataactggtttgccaaccggcgcaaagaagaggctttccgacagaagctggctatggac
acatatcctgttcacagcttgaaccccttactgcctcccccacacagccagcaccatcac
agcagcccagatacaaaactcagatacagccaacagggatccggtgatgtcacttcctct
actagcattggtcatcatggcaacagccagtcagtgttacagcaagtgtctcctcctggc
ctggacccctgtcacagcctgttgtcccctgaagccaagatgcatgtccagatttcagcc
tcgggtggagtcttgccccctgtgagcactctgactaacatccacagtctgtcccagtcc
tctcaccatcaccagcaggctcagagtctcatcatgaccctcgctgctcagagcctgagc
gctcctccgtctcagaacgtgcccatcattaacagcgtgtctggactgacggcgttgcag
cccatgcagtttcctcacagccccagcctcacaccactcactactgcacacaccactcag
caggcctacacacacatgtactcacccaagcaggagcctcctcagtactctcacccttct
cgattctcctccatggacaccagtgctatctctcatctgggttccagcaagcagtgccct
ttgcaggcttggtga
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