KEGG   Pangasianodon hypophthalmus (striped catfish): 113541541
Entry
113541541         CDS       T05759                                 
Name
(RefSeq) serine/arginine-rich splicing factor 1B
  KO
K12890  serine/arginine-rich splicing factor 1
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040  Spliceosome
phyp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113541541
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113541541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phyp03041]
    113541541
Spliceosome [BR:phyp03041]
 Common components
  Common spliceosomal components
   SR proteins
    113541541
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_3 RRM_7 Nup35_RRM_2 CoV_nucleocap PRP38_assoc TP2
Other DBs
NCBI-GeneID: 113541541
NCBI-ProteinID: XP_026794372
LinkDB
Position
Unknown
AA seq 245 aa
MSSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGAGGGAGAPRGRYGPPSRRSEY
RVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFR
SHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSR
SRSRT
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtctagcggcggagtgatccgaggtcctgcgggaaacaacgactgtcggatttacgtg
gggaatcttcctcccgacattcgcaccaaagacgtcgaggacgtgttttacaaatacgga
gctatacgtgatatcgacctgaaaaaccggagaggaggaccacctttcgcgtttgttgag
tttgaggaccccagagatgcagaagatgctgtgtacggaagagatggctatgactacgat
ggctatcgtttgcgggtggagttccccaggagtggcagaggtgggggaagaggtggagcg
ggaggtggagctggggctcccagaggcagatatggccctccgtcccgccgctctgagtac
agggtcattgtttcaggactccctcctagcggaagctggcaggacctaaaggatcacatg
cgtgaagcaggtgatgtatgttacgctgatgttttccgagatggcaccggtgttgtggag
tttgtgcgcaaagaagacatgacctacgcagtgcgaaagctggataacactaagttccgg
tcccacgagggtgagacagcttacatccgtgtaaaggtggacggcccacgcagcccgagc
tatgggcggtcacgctctcgtagccgcagcagaagccgcagccggagcaacagccgtagc
cgcagctactcgccacgccgcagcagaggatctccgcgttactcaccccgtcacagccgc
tctcgctcccgcacttaa

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