Pangasianodon hypophthalmus (striped catfish): 113541555
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Entry
113541555 CDS
T05759
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113541555 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113541555 (myo5b)
04131 Membrane trafficking [BR:
phyp04131
]
113541555 (myo5b)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113541555 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113541555 (myo5b)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
113541555 (myo5b)
mRNA cycle factors
P-body specific factors
113541555 (myo5b)
Membrane trafficking [BR:
phyp04131
]
Others
Actin-binding proteins
Myosins
113541555 (myo5b)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
113541555 (myo5b)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
113541555 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
MYO6_lever
nSTAND3
AAA_16
Ac76
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
113541555
NCBI-ProteinID:
XP_026794401
LinkDB
All DBs
Position
Unknown
AA seq
1815 aa
AA seq
DB search
MTTDQDLYVKYTRVWIPDPEEVWKPAEIIKDYKEGESVLHLKLEDESTLPYPVGPKDNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIY
GEEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRY
FATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDRRYHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCAAASLPEFKDLALTSAEEFTYTSLGQNIFIPGV
NDAVDLQKTREALTMLGVKENHQMSIFKIIASILHLGNVEIVSERDGESCHIARNDPHLL
HFCELLGVELDQMENWLCRRKLATATETYVKNMSRAQAANARDALAKHIYARLFDWIVEH
INKALHTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYSRHTGSEHFE
KPRMSNTSFIVVHFADKVEYQCDGFLEKNRDTVYEEQINILKASKFQLVADLFQEEKGAP
SSASKTSKINVRPAKPMPKSHNRDHRKSVGTQFRSSLHLLMDTLNATTPHYVRCIKPNDL
KESFVFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFNRYRVLMKKKDATADKKQV
CRNLLETLIKDPDKFQFGKTKIFFRAGQVAYLEKLRADKFRFACIKMQKTVRGWLQRRRY
QKIRKSVILLQRYGRGFLARRYAEQLRLTRAALICQKQYRMVRVRRAYLTIRKATITIQA
FTRGMFTRRLYHEYLLHHKASVIQRTVRGWLQRRKFCRARNAAVVLQCAYRRVLARRQLK
QLKIEARSAEHFKKLNVGMENKIVQLRRKMDDQKHEYKLQSEKLSETNTALVSEVSKLQK
QLDTVRSHKGENTQLSSLQDELEKLRAELQDAHAQRKKLEEEHSTEKLGLEQRVRELEKE
NSLLKEEKEQMNQKILRQSQSSGGKDGTLSQKEAGLQAELDEERLRYQNLLKEFSRLEQR
YENLQEEATYAKFVPGHRRNPSNQSSLGSDSTFPSISMSEVGDTEDTIQQVEDMGLEKAA
SDISVFMKLQKRVRELEQERKRLQTNLEKMEELSKHKAIEPKSSTSEADTNADLAYNSLK
RQELESENKKLKNDLNELRKSLAERASDDCSSNELQDSYNVLLNQLKAANEELDIRKEEV
LMLKTQIVSTAKPSENTNHINSNDISEWDNNKKPVDKEEVLQAYQGLSESKRLLEAQLQS
QSRKHQDELEALHTQIEVMKEDLEKKQEMLNHFSSLPPDALVEFSIQQEITRLTNENLDL
KEIMEKLEKNERKLKKQLKIYIKKVQELEASQAAANRPRLVRQVTLQRKEKDFEGMLEYY
KEDEALLIRMLISDMKPQIVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTSTINAIK
KLLKKNSDDFEMTSFWLANTSRLLHCLKQYSGEEAFMTQNTSKQNEHCLKNFDLAEYRQV
LSDLSIQIYQQLIRIAESMLQPMIVSAMLESGSLTGVKPLGYRNRSSSMDCDSGGPSGYT
LEALIRQLSQFHTLMSDHGLDPEITRQVVRQLFYCINAVSLNNLLLRKDMCSWSTGMQLR
YNISQMEEWLRGRNLHQREIMLTIEPLIQAAQLLQVKKKTSQDAEAICSMCNILSTQQIV
KILNLYTPLNEFEERVTVSFIRDIQNLLQGRVENNQLLVDTKHTFPVLFPYTPSALSLEA
LHIPASLNLDFLIRV
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgaccaggacctctacgtcaagtacactcgggtttggatccccgacccagag
gaggtgtggaagcctgctgagattattaaagactacaaagagggagagtcggtcctgcac
ctcaaactcgaagatgaatcgacactgccatatccagtcggtcctaaagacaacccgcta
ccgttccttcgaaaccctgacattctggtgggagagaacgacctcacggccctcagctac
ctgcacgaacctgcagtgctgcacaacctcaaggttcgcttcctggagtccaaccacatc
tacacctactgtggtattgtactggtggccattaatccatacgagcagctgccgatttat
ggcgaggaggtcatcaatgcctacagcgggcaaaacatgggtgacatggaccctcatata
ttcgccgtagcagaggaggcttataaacagatggccagagatgagaagaaccagtcgatt
attgtgagcggtgaatcaggagctgggaagacggtctctgccaaatacgccatgcgctac
ttcgccactgtgggaggatccgccaatgacacgaacgtggaggagaaagtgctggcatcc
agccccatcatggaggctatcggaaatgcaaagacgacacgtaacgacaacagcagtcgc
ttcgggaaatacatccagatcggctttgacaggaggtatcacatcatcggcgccaacatg
cgcacgtatttgctggagaaatccagagtggtgtttcaggctgaggatgagaggaactac
cacatcttctaccagctgtgtgctgctgcctcactccctgagttcaaagacctggccctg
accagtgcagaagaattcacttacacctctctgggtcagaacatcttcattccgggggtt
aatgatgctgtggatttacagaagacacgggaagccctgaccatgctgggtgtgaaggag
aaccatcaaatgagcatcttcaagataattgcctccatcttgcaccttgggaacgtggag
attgtttctgagagagatggagagtcatgccatatcgctagaaacgaccctcaccttctt
catttctgtgagctgctgggggtcgagctggaccagatggaaaactggctgtgccgtaga
aagttagccacggcaaccgagacctacgtgaagaacatgtcccgcgcccaggctgctaac
gcccgcgacgctctggccaaacacatatacgcccgtctgttcgactggatcgtggagcac
atcaacaaagccctgcatacctcctccaaacagcactccttcatcggagtgttggatatc
tatggatttgaaacgtttgagattaacagcttcgagcaattctgcatcaactacgccaac
gagaaacttcagcaacaattcaactctcatgtttttaaactggagcaagaggagtacatg
aaggagcaaatcccatggacactcatcgacttttacgacaaccagccttgcattgaccta
atcgaggccaagctcggtatcctggacctgctggatgaagagtgcaaggtacctaaagga
acagatcagaactgggcgcagaagctctacagccgccacacaggcagcgagcactttgag
aagccgagaatgtccaacacgtcgttcattgtggtccactttgctgataaggttgagtat
cagtgtgatggcttcctggaaaagaacagggacactgtgtatgaagaacagatcaacatc
ctgaaggccagcaagttccagctggtggcagatctcttccaggaagaaaaaggagctcct
agttcagcaagcaaaacctctaagatcaacgtacgtcctgctaaacccatgcccaaaagc
cacaaccgcgatcaccgcaaatctgtaggcactcagtttcggagttccttacatcttctg
atggacactctgaatgctacaactccgcactatgtacgctgcataaaacccaacgacctc
aaagaatcctttgtgtttgattccagaagagccgtccagcagctacgagcatgtggtgtt
ctggagaccattcgcatcagcgctgcaggatatccatccaggtggacgtacccagatttc
tttaacagatatcgggtgctgatgaagaagaaagacgcgactgctgataagaagcaggtg
tgcagaaacctgctggagactttgatcaaggatccagataagttccagttcggaaagact
aagatcttcttccgagccggtcaggtggcgtacctcgagaagctccgagccgacaagttc
cgcttcgcctgcattaagatgcagaagacagtgcgaggatggctgcagaggagacgctac
cagaagatccgcaagtcggtcatcttgctgcagagatacggccgcggcttcctggcgcgc
aggtatgcagaacagttgcgtctcactcgagcagctcttatctgtcagaagcagtacagg
atggtgagggtccggcgcgcgtatctgaccattcgcaaagctacaatcaccatccaggcc
ttcacacggggcatgttcacacgccgcctgtaccacgagtacctgctgcaccacaaggcc
agtgtcatccagagaaccgtgcgtggatggctgcagaggaggaagttctgccgtgcccga
aacgcagcggtggtgctgcagtgtgcttacagacgtgttctcgccaggcgacagctgaag
cagctgaagatcgaggctcgctcagcagaacacttcaagaagctcaacgtcggcatggag
aataagatcgtccagcttcggagaaagatggacgatcagaaacacgagtataagttgcag
agtgagaagctgtccgaaactaacaccgcgttggtatcggaggtcagcaaactgcagaag
cagctggacacggtgcgcagtcataaaggtgagaacacgcagctgagctcactgcaggac
gagttggagaaactgagggcggagctacaggacgcacacgcccagaggaagaagctcgag
gaggagcacagcactgagaagctgggactggaacagagagtccgcgagctggagaaagaa
aactctctgctgaaagaggagaaagaacagatgaaccagaagatccttcgccaatcgcag
agctccggaggtaaggatggcactttgtctcagaaagaggctggtctacaggctgagctg
gatgaagagagactgcgctatcagaacctgctgaaggagttttccagactggagcagaga
tatgaaaaccttcaggaggaggccacttatgccaaatttgttccaggccatcggaggaac
ccatccaaccaaagcagcttgggctctgactccaccttcccctccatctctatgtctgaa
gtaggagacactgaggataccattcagcaggtggaggacatgggactggagaaggcagcc
agcgacatcagtgtattcatgaagctgcagaaaagagtgagagagctggagcaggagagg
aagagactccagaccaacctggagaagatggaggagctcagcaagcacaaagcgattgaa
ccaaagagctcgacgtcagaggcagacacaaatgcagatctggcatacaacagtctcaag
aggcaggagctggagtctgagaacaagaagctgaagaacgacttgaatgaactcaggaag
tccctggcggagcgagcctctgacgactgctcgtccaatgaactgcaagacagctacaat
gttctgctcaatcagctcaaggcagccaatgaggagctggacatacgcaaagaggaggtt
cttatgctaaaaacacagatcgtcagcaccgccaagccgtccgaaaacaccaatcacatt
aactccaacgacatctccgaatgggacaacaacaaaaagcctgtggacaaggaggaggtt
ttacaggcctaccagggtctcagtgagtccaagaggctgctggaggcacagcttcaatcc
cagagccggaagcaccaggatgagctggaggctctgcacacacaaatcgaggtgatgaag
gaggatctggagaagaagcaggagatgctgaatcacttcagctcgctgccccccgatgcc
ctggtggagttcagcatccagcaggagatcacacgcctcaccaacgagaacctggacctc
aaggagatcatggaaaagctggagaaaaatgagaggaaacttaaaaagcagctcaagatc
tacatcaagaaagttcaggaacttgaagcatctcaagcagcggcgaatcggcccaggctg
gtcagacaggtcacacttcagaggaaagagaaggactttgagggcatgctggagtactac
aaagaggacgaggccctgctgattaggatgcttatcagtgacatgaagccccagatcgtt
tctgctacagtcccttgcctcccagcgtacatcctcttcatgtgcatccgtcacgcagac
tacatcaacgatgaccagaaagtgcactctctgctcacctccaccattaacgctatcaag
aaacttctcaagaaaaacagtgacgacttcgagatgacgtctttctggctggctaacacg
agccgactcctgcactgcctgaaacaatacagcggcgaggaggcattcatgacccagaac
acatctaaacagaacgagcactgcctgaagaactttgacctggctgagtaccggcaggtt
ctgagtgacctgagcatccagatctaccagcagctcattagaatagctgagagcatgctg
cagcccatgatcgtgtcggctatgctagagagcggcagtctgactggagtgaagcccctg
ggctacaggaaccgctcctccagtatggactgtgacagtggaggcccttcaggctacacg
ctggaggctctgatcaggcagctcagtcaattccacacactcatgagcgaccacgggctg
gaccccgaaatcacccggcaggttgtgcgccagctcttctattgtatcaacgccgtctca
ctcaacaacctgctgctgcgcaaagacatgtgctcctggagcaccggcatgcagctcagg
tacaacatcagtcagatggaagagtggttgaggggacgaaatcttcaccagagggaaatt
atgttaaccatcgagcccctcatccaggctgctcagctgctacaggtgaagaagaagaca
tctcaggatgccgaggccatctgctccatgtgtaatattcttagcacacaacagattgtg
aagatcctgaatctgtacactccgctgaacgagtttgaggagagggtcaccgtgtccttc
atcagagacatacagaatcttctacaaggccgtgtagagaacaaccagctcctggtggac
accaagcacacgttccccgtgctcttcccttacactccttcagctttgagcctggaggcc
ctgcacatccctgcctctctcaacctggacttcctcatcagagtctga
DBGET
integrated database retrieval system
