Pangasianodon hypophthalmus (striped catfish): 113541579
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Entry
113541579 CDS
T05759
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113541579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113541579
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
phyp04031
]
113541579
Membrane trafficking [BR:
phyp04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
113541579
GTP-binding proteins [BR:
phyp04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
113541579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
113541579
NCBI-ProteinID:
XP_026794440
LinkDB
All DBs
Position
Unknown
AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL
VGHKCDLEPQRQVSQQEAEKLAAAYGMRYVETSARDAINVERAFTELTRDIFELVKRGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaagctatatggctataccagttccgattgatcgtcattggcgactcgacagtgggc
aagtcttgtctgatcaggcgtttcacagaggggcgttttgcacaggtgtctgaccccacc
gttggagtggatttcttttcccgtctggtggagattgagccaggcaaacgcatcaaactg
cagatctgggacacggctggacaggaaaggttcaggtctatcaccagggcttactaccgt
aattcagtgggtggcctgctgctctttgacatcactaatcgtcgctccttccagaatgtt
catgagtggctggaggaggcgcgcagccacgtgcagccgcacagcatcgtcttcctgctg
gtaggccacaagtgtgacctggagccgcagcggcaggtgagccagcaggaagcggagaag
ctggcggccgcctacggcatgcgctacgtggagacgtcggcgcgcgacgctattaacgtc
gagcgggctttcacagagctgacacgtgacatctttgagcttgtcaaacgaggtgacatc
accatccaagaaggctgggagggggtgaagagtggcttcgtgcccaacgtagtgcactca
tctgaggaggtgaccaagagcgatcgccgctgcctctgctga
DBGET
integrated database retrieval system
