Pangasianodon hypophthalmus (striped catfish): 113541587
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Entry
113541587 CDS
T05759
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137
Mitophagy - animal
phyp04140
Autophagy - animal
phyp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113541587
04137 Mitophagy - animal
113541587
04148 Efferocytosis
113541587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113541587
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113541587
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
HIF-1a_CTAD
bHLH_HIF1A
PAS
HIF-1
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
113541587
NCBI-ProteinID:
XP_026794452
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MCLECRKARSRVAAQSRREKESQLFRELAALLPLAPYEADQLDKASVIRVTISYLHLRAL
LGIPDSTAVGAMMYPVSASQGELPESIEKWLLDTLEGFLLLMSLCGKIIFITKDVISHIG
IKQMDLIGRSLFDFIHPSDHKEIKEILTSIIGSEDQQKCEVFFRIKGAVKNMLTPWQVIH
CTGNKRSSSIPGSSYLLLLCRSLPVQEVIEMEAHLNFKTFLSIHEPDMKFTYCHSGVLEL
TGFSDIELYGQSVYQYYHPSDCQHIFKAHLCLFSKGQVYTGKYRLLQKHGGYVWVETDAT
VVYNVHTGKPERIVCINYILSGVELPDVVFSLEQTQCLLNAFHAPYTSMTRKETNQATSK
TTDKNSSLVASPCERDEPTNSCNEILHKTALCGSLSNDMRDLDLDSLAPYIPTHEEDFHL
TPILDGVASDSVLNRHPPSLSETWLTLDQKLPTDSEAICFHRLNINENRMLSSSSQWHES
THAMNKKQQERFKNQISIPEKKSDHWTDVSQHLTKSSSENFDGRTVWTCSQSYAEPVHLA
YKYAELSWCPLGSSTQHSNQNTEEKMPSMLVNLPVLSRWECEVNAPLGPTSHLLQGTELT
NVLDQVASWECWY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttagagtgtaggaaggcccgatcccgtgtggcagctcagagcagacgggagaaa
gaaagccagctgtttagagagttagcggccctgctgcccctggccccatatgaggcagat
cagctggataaagcttctgtcatcagagttacaatctcctacttgcacctcagagctcta
ctgggcattcctgactccactgcagtaggagctatgatgtatcctgtctcagcaagtcag
ggggagttaccagaatcaatcgagaagtggttactagatacacttgaaggattcctgctc
ttaatgtccttgtgtggcaagattatcttcatcacaaaggatgtcatctctcatatagga
atcaaacagatggatttgattggccggagtttgtttgattttattcatccatccgatcac
aaggagatcaaagagattcttacaagcataatagggagcgaagaccagcagaagtgtgag
gttttcttccgaatcaaaggtgcagtcaaaaacatgctgaccccctggcaggtgattcac
tgcactggaaacaaaaggtcgtcatctattccaggatccagctatctgcttctcctgtgc
agatcattacctgtgcaagaagtcattgagatggaggctcatctgaatttcaaaacattc
ctgagcatccatgagccagacatgaagttcacctactgccactctggggtcttggaactg
actggctttagtgacattgagctgtacggtcagtctgtgtaccagtactatcatccttct
gattgccagcatatcttcaaggcacacctctgtttattctcaaagggccaggtgtacact
gggaagtatcggctcctacagaagcacggtggctacgtttgggtagagacggacgccaca
gttgtgtacaacgttcacacagggaagccagagagaatcgtgtgcatcaactatattcta
agtggagtggagcttccagatgtggtgttttcactggaacagacacagtgcctgctgaat
gccttccatgcaccgtacacttcgatgacacgtaaagagaccaatcaggcaacatctaaa
accactgacaagaacagcagccttgtggcctctccctgtgagagagacgaaccaaccaac
agctgtaatgagattttgcacaagactgctttgtgtggctcactttccaacgacatgcgt
gacctggatttggatagtctagccccatacattcccacccatgaagaggacttccattta
actcctattttagatggagtggcaagtgattcagtattaaacagacacccgccctctctc
agtgagacatggttaactctggaccaaaagctgcccacagattcagaagcaatctgtttc
cacaggctaaatataaacgagaaccgtatgctcagttcatcaagccaatggcatgagagc
acacacgcaatgaacaaaaaacaacaggagcggtttaagaatcaaatctccattcctgaa
aaaaagagcgatcattggacagacgtctctcaacatctcactaaatcttcctcagaaaat
tttgatggaagaacagtctggacttgcagccagagttacgcagagccagtgcatttggcc
tacaaatatgccgagctctcgtggtgtcctctgggatcttcaacgcaacatagcaaccaa
aacacagaggaaaaaatgccctcaatgctagttaacttgcctgtactgagcaggtgggaa
tgtgaagtgaatgcacccctgggacccacttcacacttgcttcaagggactgaactcacc
aatgtcctggatcaggttgcttcatgggagtgctggtactaa
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