Pangasianodon hypophthalmus (striped catfish): 113541606
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Entry
113541606 CDS
T05759
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113541606 (tial1)
03041 Spliceosome [BR:
phyp03041
]
113541606 (tial1)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113541606 (tial1)
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113541606 (tial1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
Motif
Other DBs
NCBI-GeneID:
113541606
NCBI-ProteinID:
XP_026794490
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MEDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITELDNVGFSILQHTSNDPYC
FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTD
DIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN
WATRKPPAPKNTQDTSPKQLRYEDVVNQSSPQNCTVYCGGIQSGLSDHLMRQTFSPFGQI
MEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHIVKCYWGKESPDMAKTVQPVTEQ
QVDYGQWGHWNQMYGNPQQYGQYMTNGWQVPSYGMYGQTWNQQGFGVEQSQSPAWVGGFG
TQPSQAQPGPVMNQANFGMAGYQTQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagagccacccgaaaaccctttacgtgggaaacctgtctagggatgttaca
gagaacttaatccttcaactgttcacccagattggtccttgtaaaagttgtaaaatgata
acagagttggataatgttggattttctatattgcagcacacaagcaatgacccatattgt
tttgtggagttctatgagcacagagatgctgcagctgctctagcagcgatgaacggaagg
aagattctaggaaaggaagtcaaggtgaattgggcaacaactccaagcagtcagaagaaa
gacacatccaatcatttccatgtttttgtgggagatctgagtcctgagatcaccactgat
gatatcagagctgcatttgctccctttgggaaaatctcggatgctcgtgtggtgaaggat
atgacaacagggaaatcaaaggggtatggatttgtgtccttctataacaaactggatgcg
gagaatgccatagtacacatgggcggccagtggttaggaggacggcagattcggaccaac
tgggccactcggaagcccccagcccctaagaatactcaagacaccagcccaaagcagctg
agatatgaagatgttgtgaaccagtcaagtcctcagaactgcactgtgtactgtggtggc
atccagtcagggctctcggaccaccttatgcgacagacattttcaccttttgggcaaata
atggaaataagagttttcccagaaaagggctattcttttatcaggttctcttctcatgaa
agtgctgcccatgccattgtgtcagtgaatggaacaaccattgaaggccatattgttaag
tgctactggggcaaagagtcacctgatatggcaaaaactgtccagcctgtcacagaacaa
caggtggattatggacagtggggccactggaatcagatgtatggaaatcctcagcagtat
ggccaatacatgacaaatggatggcaagtaccatcctatggaatgtatggacagacatgg
aatcagcagggatttggagtggaacaatcacagtctcctgcctgggtgggaggctttggg
actcagccctctcaggcacagcctggccctgtgatgaaccaggctaactttggcatggct
ggctaccagacacagtga
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