Pangasianodon hypophthalmus (striped catfish): 113541627
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Entry
113541627 CDS
T05759
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1 isoform X1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113541627 (dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113541627 (dkc1)
03032 DNA replication proteins [BR:
phyp03032
]
113541627 (dkc1)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
113541627 (dkc1)
Prokaryotic type
113541627 (dkc1)
DNA replication proteins [BR:
phyp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
113541627 (dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
UPF0113
Motif
Other DBs
NCBI-GeneID:
113541627
NCBI-ProteinID:
XP_026794529
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MADGEIASAKKEKKKKKAKISDEEVGELQEMGDFLIKPESKVAKLDTSQWPLLLKNFDKL
NIRTAHYTPLPHGSNPLKRTIHDYVRSGFINLDKPANPSSHEVVAWIKRILRVEKTGHSG
TLDPKVTGCLIVCIDRATRLVKSQQSAGKEYVGIVRLHNAIENEHQLARALECLTGALFQ
RPPLIAAVKRQLRVRTIYESKLIEYDPEKRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQ
MQELRRVRSGVLGEKDCMVTMHDVLDAQWQFDHNKDETYLRRVIYPLEKLLVSHKRIVMK
DSAVNAICYGAKIMLPGVLRYEDGIEVNQDIVVITTKGEAICTAVALMTTAVISTCDHGV
VAKIKRVIMERDTYPRKWGLGPKASQKKMMIQKGLLDKHGKPNGSTPANWTEGYVDYSSK
PKAAVAAEDGDANQAGAKRKRDESGSEGEAAPSTPKTDEVKKEKKKKKKEKKMKLAEEVS
EAAEATEEAAAEGEAEVTESAKKKKKKKKVKEAEAGSD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgaaattgcttcggctaagaaagagaagaagaagaagaaagcaaagatt
tcagatgaagaagtcggggaactccaagaaatgggagatttcctcatcaaacctgaatcc
aaggttgccaaactcgacacgtcccagtggcctttgctgctgaagaactttgataagctg
aacatcaggacggcgcactacacacctctgccacacggttcgaatcccctgaagaggacc
attcatgattacgtcagatctggttttattaacttggacaagccagcaaatccatcctct
cacgaagtggttgcgtggatcaaacggatcctgcgcgtggagaagacgggccacagcggg
acgctcgacccaaaggtcacaggctgtctgattgtgtgcatcgacagagcaacgcgattg
gtcaaatctcagcagagtgcaggcaaagagtacgtgggcatagtacggctgcacaatgcg
atagagaacgaacatcagctcgcgagggctctagagtgtctcactggagctctgttccag
aggcctcctctcatcgctgcagtgaaacgacagctacgagtcaggaccatctacgagagc
aagctcatcgaatacgacccggagaaaagactcggtattttctgggtgagctgtgaggcg
ggcacgtatatcagaacgctgtgtgttcatctggggctgctgctgggggttggaggtcag
atgcaggagctcaggagggttcgctctggagtgttgggagagaaggactgcatggtgacc
atgcacgacgtactagacgctcagtggcagttcgaccacaacaaggatgagacgtacctg
agaagagtcatctaccctctggagaagctgctcgtcagccacaagaggatcgtcatgaag
gacagcgcggtcaatgctatatgctatggtgctaaaatcatgttaccgggtgtgttgcgg
tatgaagatgggatagaggtgaaccaggacatcgtcgtcattacgactaaaggagaagcc
atttgtacagcggtggcactgatgacgacggcggtcatctctacatgcgatcacggcgtt
gtggctaagatcaagagggtcatcatggaaagagacacatatccacgcaaatggggctta
gggccaaaggctagtcagaagaaaatgatgatccagaaaggccttctagataaacacggc
aagccgaacgggagcactccggccaactggacggagggttatgtggactacagcagtaaa
cccaaagcggcagtagctgctgaagatggtgatgctaatcaggcaggagcaaagaggaaa
cgtgacgagagcggaagcgagggcgaagccgcgccctcaaccccaaagacagacgaggtc
aagaaagagaagaagaaaaagaagaaagaaaagaaaatgaagctggctgaggaagtatcg
gaagcagcagaagccactgaggaagcagcagcagaaggggaagcggaggtcacagaaagt
gccaaaaagaagaagaagaaaaagaaggtgaaagaggctgaggctggttcagactga
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