Pangasianodon hypophthalmus (striped catfish): 113541724
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Entry
113541724 CDS
T05759
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03030
DNA replication
phyp03410
Base excision repair
phyp03420
Nucleotide excision repair
phyp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113541724 (rfc2)
03410 Base excision repair
113541724 (rfc2)
03420 Nucleotide excision repair
113541724 (rfc2)
03430 Mismatch repair
113541724 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phyp03032
]
113541724 (rfc2)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113541724 (rfc2)
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113541724 (rfc2)
DNA replication proteins [BR:
phyp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113541724 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
113541724 (rfc2)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113541724 (rfc2)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113541724 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
113541724 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
Mg_chelatase
Viral_helicase1
AAA_24
RCF1-5-like_lid
AAA_11
Rad17
RuvB_N
AAA_19
AAA_assoc_2
MipZ
nSTAND3
AAA_18
ABC_tran
AAA_28
AAA_5
AAA_23
AAA_25
AAA_30
DNAX_ATPase_lid
MeaB
NTPase_1
RNA_helicase
FtsK_SpoIIIE
SLFN-g3_helicase
DUF815
Motif
Other DBs
NCBI-GeneID:
113541724
NCBI-ProteinID:
XP_026794669
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MDVEMKEADGEQNQTDAQNNKKEDATKSSTSTYELPWVEKYRPLKLNEIVGNEETVSRLE
VFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIK
MFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPI
QSRCAVLRYSKLRDEQIMMRLMEVVEKESLHTTNDGLEAIIFTAQGDMRQALNNLQSTHS
GFGFINSENVFKVCDEPHPLLVKNMLEQCVSANIDEAYKIIAQLWSLGYSPEDIIGNIFR
VCKTFQMPEYLKLEYIKEIGYTHMKIAEGVNSLLQLAGLLGRLCSKTAAPEAS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagatgaaagaagctgatggcgaacaaaatcaaacagacgcacagaataat
aaaaaagaagatgctacaaagtcttcgacgagcacttacgaacttccctgggttgaaaaa
tacagaccgctgaagctgaatgaaatagttggaaatgaagaaaccgtcagcagactggag
gtgtttgccagagagggaaatgtaccaaacatcattattgctggacctcctggcaccgga
aaaacaacaagcattttatgtttggccagagctcttctgggcccggcaatgaaggacgct
gtgctcgagctgaatgcctcaaatgatcgaggtattgacgttgtacgaaacaagatcaag
atgtttgcccagcaaaaagttactctccccaaaggacgtcacaaaatcatcattctggat
gaagctgacagcatgacggatggagcacagcaagctctgaggagaacaatggagatctac
tcgaagaccaccaggtttgccttagcctgtaatgcgtcagataaaattatagagccaatt
cagtcacgctgtgcagtgctgcgctacagtaagctgagggatgaacagatcatgatgagg
ctgatggaggtggtggagaaagagagtctgcacaccaccaacgatggactggaggccatt
atcttcaccgcacaaggagacatgagacaggcactaaacaacctgcagtccacccattct
ggatttggttttatcaacagtgaaaatgtgttcaaggtatgtgatgagccacacccactg
ctggttaaaaacatgcttgaacaatgtgtcagcgccaacatcgacgaggcttacaagata
atagcacagctttggtcgctcggctactctcctgaagatataatagggaacatcttcaga
gtgtgtaagaccttccaaatgccggagtacttgaagctggagtatatcaaggagattggc
tacacccacatgaagatagcagaaggagtaaactctctcctccagctggctggactgtta
ggacgtctctgcagtaagactgcagcacctgaagccagctaa
DBGET
integrated database retrieval system
