Pangasianodon hypophthalmus (striped catfish): 113541747
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Entry
113541747 CDS
T05759
Name
(RefSeq) nectin-1-like isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03266
Virion - Herpesvirus
phyp04514
Cell adhesion molecule (CAM) interaction
phyp04517
IgSF CAM signaling
phyp04520
Adherens junction
phyp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
113541747
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113541747
04517 IgSF CAM signaling
113541747
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
113541747
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113541747
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113541747
04090 CD molecules [BR:
phyp04090
]
113541747
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
Nectin family
113541747
CD molecules [BR:
phyp04090
]
Proteins
113541747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
Sema4F_C
Ig_PVRIG
Ig_5
Motif
Other DBs
NCBI-GeneID:
113541747
NCBI-ProteinID:
XP_026794697
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MFTLAFQFPLIAVLAISGTSGQTVHTDSDRSGYVGTQVELRCHFANSKPPVKISQVTWQK
SVNGTKQNVAIANPALGVSVLPAFKDRVRFKNPAVRQRAPSLEDTTIIFNNLKLSDEATY
ICEYTTFPAGNRESTVNLTIYARPMVQMSLSTPTIVAGSKDMKMTVATCVSANGKPPAVI
TWDTELDGEANTEEIRNTDGTITVRSDYIMTPSREAHEQRLTCISTYNNDQQTDNVILNV
QYEPEVSIEGFDGNWYINRENVQLTCLADANPAVSSFQWRYLNGSMPNTAEQREDTLIFK
GPVTYEMAGTYMCDATNSIGTGSASVEVIITESPSSTHAEQQRAGAAIGGAVVCGTVLLA
AIILLVVFFHRQRRTFKGDYSTKKQVLANGFGKSSDLSSCPSLPQSLTYPEDLNYPEDEK
KPELYGSPSFLGESVQEFHNNPPNRMKTYSPVEDSKRLRYNEQSYRDGYGSEMEVSVDMV
PQKDGSVISKEEWYV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgttcactttggctttccagtttcctctgatcgccgtccttgcaatatcaggcacgagt
ggtcagactgttcacacggacagtgaccggtctggctatgtgggcactcaggtggagttg
cgttgtcattttgccaacagcaaaccaccggtgaagatctcccaggtcacctggcagaag
tctgtcaatggcaccaagcagaacgtggccatcgccaatccagctctgggtgtgtctgtg
ctaccagcttttaaagaccgggtaaggtttaagaacccagcggttcgccaaagagcacct
tcactggaggacacgactatcatcttcaataacttgaaactgtctgatgaggccacgtac
atctgcgaatacaccacctttcctgcgggtaacagggagagcacggtcaatctcaccatt
tacgctcgaccgatggtccagatgagtctgtccacacccaccatagtggcaggatcaaaa
gatatgaaaatgaccgtagcaacgtgtgtctcagccaacgggaagccccctgctgtgatc
acatgggacactgagttagatggtgaagcaaacactgaggagataaggaacactgatggg
acgataacagtgcgcagtgactacatcatgacacccagtcgagaagcacatgagcagcga
cttacctgcatctccacctacaataatgatcagcaaacagacaacgttattctcaacgta
cagtacgagccagaggtgagcattgagggctttgatggaaactggtatataaatcgcgag
aatgttcagctaacttgcttggccgatgcgaatccagccgtttcttcatttcagtggaga
tatctgaacggctccatgccgaatacagctgagcaacgcgaggacacactaatctttaag
ggtcctgtaacctatgagatggcagggacatacatgtgtgatgccaccaacagtattggt
acaggttcagcttcagtcgaggtgattataacagagtcccctagctccacacatgctgag
caacagcgagcaggcgctgctattggtggagcagttgtgtgtggtacagtgctgctggca
gccattatattgttggtggtcttctttcatcggcaaaggcgcacgtttaaaggagattac
agcaccaaaaaacaggtcctggccaacggctttggcaaatctagcgacctgtcgtcgtgc
ccctctctgcctcagagcctgacctatcccgaagacctgaactatcctgaggatgagaag
aagcctgaactttatggaagccccagtttcttaggtgaaagtgttcaggagttccataat
aatcctcccaacaggatgaagacctacagtccagtggaggacagcaagaggttgagatat
aacgaacagagctacagggatggctatgggtctgaaatggaagtctcggtggatatggtt
cctcaaaaggatggttctgtcatctctaaagaggagtggtatgtgtga
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integrated database retrieval system
