Pangasianodon hypophthalmus (striped catfish): 113541794
Help
Entry
113541794 CDS
T05759
Name
(RefSeq) syntaxin-5-like
KO
K08490
syntaxin 5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113541794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113541794
Membrane trafficking [BR:
phyp04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
113541794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
DUF16
DUF7260
Peptidase_S46
KIF21A_4th
Motif
Other DBs
NCBI-GeneID:
113541794
NCBI-ProteinID:
XP_026794766
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MNTRRRHTPRSNQEGVYTGPSQTQTQLVQPLETPLSVPLPLAPPVDSISMSCRDRTTEFQ
SVCKSLQGRQNGAQGIKPVHSAIRQRSDFTLMAKRIGRDLSNTFAKLEKLTILAKRKSLF
DDKAAEIDELTYIVKQDINSLNKQIAQLQELVRSRNGQNSRHLQTHSNTIVVSLQSKLAS
MSSDFKSVLEVRTENLKQQRSRQEQFSQSPASTSSFDNSSFSNSVLMQDTSKKADISIDM
DLRSSQQMLLLNEKDSFIQDRANTMQNIETTIVELGSIFQQLAHMVKEQEETVHRIDANV
EDTQLNVDFAHTEILKYFQSVSNNRWLLIKIFLILIIFFFIFVVFLA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccgccggcgccacactcctaggagcaaccaggaaggggtttacactgggcct
tcacagacccagacccagctggtccagccgctggagacccctctgtctgtacctcttccc
ctcgctcctcctgtcgactccatcagcatgtcctgccgagaccgcaccactgagtttcag
tctgtgtgcaagtcgctgcaggggagacagaatggagcacagggcattaaaccagttcac
agcgctatcaggcagaggagtgacttcacgctcatggcaaagagaattggcagggacctt
agcaacacctttgcaaagttggaaaagctcacaatactggccaaacggaaatccctcttt
gacgataaagcagcggagattgatgagttgacgtatattgtgaaacaggatattaacagc
ctgaataaacagatagcccaactccaggagcttgtccgatccagaaatggccagaacagc
agacatcttcaaacacattccaatactattgttgtatcactgcagtcaaaattggcttca
atgtcaagtgacttcaagtcagttctggaagtgagaacagagaacctgaagcaacagaga
agcaggcaagagcagttctctcagtcgccagcctccacctcttccttcgataactccagc
tttagcaattcagtgttgatgcaggatacttccaagaaagcagatatctccatagacatg
gatctccgttccagccagcagatgcttctcctcaatgagaaggactcttttattcaggac
cgagcaaacactatgcaaaacatagagactactattgtcgagctgggatctattttccag
caactggcccacatggtgaaagagcaggaagagacagttcacaggattgacgctaatgta
gaagacactcaactcaatgtggacttcgctcatacggaaatccttaagtactttcagtcc
gtctccaacaatcgctggttgctcatcaaaatcttcctcatcctcatcattttcttcttc
atctttgtcgtcttcttggcctga
DBGET
integrated database retrieval system
