Pangasianodon hypophthalmus (striped catfish): 113541818
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Entry
113541818 CDS
T05759
Name
(RefSeq) glutamate receptor 1-like isoform X1
KO
K05197
glutamate receptor 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113541818
04082 Neuroactive ligand signaling
113541818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113541818
Ion channels [BR:
phyp04040
]
Ligand-gated channels
Glutamate (ionotropic)
113541818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
113541818
NCBI-ProteinID:
XP_026794815
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MEPSLALLLTSLLGWCSCSSFPSNINIGGLFPTDSHEYEVFRFALSQQHELPKLVPQVDM
VDVGSSFAMTYAFCSQFSKGVYAIIGLYDKKTMNMLMSFCGALHVCFVTPSFPIDTNNQF
VIQLRPQLQDALIGLVEHYKWTKFVYMYSSDSGLTVLQKILDTAAEKSWQVTSINFDTLT
EAAFLNSIQDLDSKKEHKIILDCELERLNSILNLIAAQRKNLKNYHFILANLGFLDLNLT
EFRKGGANITGFQLMNYTDPMVSRTIDDWLEFDSKDLKSPKRRLKYTGALTYDGVSVMAT
AFQNLRRQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVQFEGLTGHVQFNEKGHRT
NFTVSVMELVPSGPKKVGYWNENEKYVSTATYAHTLNETFGMHNRTYIVTTILESPYVML
KKNHEQLVGNDKYEGYCVELAAEIAKHVGYSYKLELVPDGKYGARDPDTKMWNGMVGELV
YGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWMC
IVFAYIGVSVVLFLVSRFSPYEWHSDDSEDGGEQQSQNRTPSPEAGQSQSQGQHGQSPSQ
QDKQEKPPEHTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYT
ANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDGGSTKEFFMRSKIAVFEKMWSYMKFA
DPSVFVKTTDDGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATP
KGSDLRNRVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFY
ILIGGLGLAMLVALVEFCYKSRIQSRRMKQIIDAAMLGSSLSRMGSGGENGRVVAHDFPK
AAQTLPCMGQAAGMGINTSGM
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggagccaagcctggccttactgctcaccagcttgctcggctggtgctcgtgctcgagt
ttcccaagtaacattaatataggcggtttgttcccgaccgactcgcatgaatatgaggtg
ttccgattcgcgctatctcagcagcacgagctccccaaactggtgccacaagtggacatg
gtggacgtgggcagcagtttcgccatgacatacgcattttgttcccagttctctaaagga
gtctacgccatcatcggtctatatgacaagaagactatgaatatgttgatgtcattctgt
ggggctctgcatgtctgcttcgtcacgcccagtttcccaatcgataccaacaatcagttt
gtaatccagctcaggccccagctccaggatgctctgatcggccttgtggaacactacaag
tggaccaaatttgtctacatgtatagctcagattcaggactgactgtgctacagaagatc
ctggacacagctgcagaaaagagctggcaggtgacatccatcaactttgatactcttaca
gaggcagccttccttaactccatccaggacttggacagcaaaaaagagcacaagatcatt
ctggactgcgaactggagagacttaactccattcttaacctgattgcagcacaaagaaag
aatctgaagaattatcactttatcctggcaaacctgggctttctggacctgaatttgacg
gagttcaggaaaggtggtgccaacatcacaggcttccagctaatgaactacacagacccg
atggttagcaggaccatcgatgactggctggagtttgacagcaaagacctgaagagccct
aagaggagactcaagtacacaggagcgctcacctatgatggtgtgagcgtcatggccact
gctttccaaaaccttaggaggcagcgtattgacatttcccggcgggggaacgcgggcgaa
tgtctggccaaccccccagcaccgtggggacaaggcattgacatccagagagccctccaa
caggtgcagtttgaaggtctaacaggccacgtccagttcaacgagaaaggacatcgaaca
aactttacagtcagtgtaatggaacttgttccgagtggacccaagaaggtgggctactgg
aacgaaaatgagaagtatgtgagcacggcgacgtacgcccacacactcaacgagacgttc
ggcatgcacaataggacatacatagtcaccaccattctagaatctccgtacgtgatgctg
aagaaaaatcacgagcagctggtagggaacgataagtacgagggatactgcgtggagttg
gccgccgagatcgccaagcatgtgggctactcctacaagctggaactcgtaccagacggc
aagtatggagcccgagaccctgataccaaaatgtggaacgggatggttggagagctggtg
tatgggaaagctgacgtagccgtggctcctctcaccatcaccctggtccgagaggaggtc
atcgacttctccaagcccttcatgagcttgggcatctctatcatgatcaagaagcccacc
aaatccaaaccaggcgtcttctccttcctggacccgctggcgtacgagatctggatgtgt
atagtgtttgcatacattggcgtcagcgtggtcctgttcctggtgagccgcttcagtccg
tacgagtggcacagcgatgactcagaggacggcggtgagcagcagagccagaaccggacg
ccgtctcctgaagctggacagtcgcagtcgcagggtcagcatggccagagccccagccag
caagacaagcaggagaaaccacctgagcacaccaacgagttcggcatcttcaacagtctg
tggttctctctgggtgccttcatgcagcaagggtgcgatatttcacctagatcactgtct
ggtcgtatagttggaggcgtctggtggttcttcaccctcatcatcatctcctcctacacg
gccaacctggctgccttcctgactgtggagaggatggtgtcacccatagagagcgcagaa
gacctggccaagcagacagagatcgcctacggcaccttggacggaggatcaaccaaagag
ttcttcatgagatcaaagatagccgtgtttgagaagatgtggtcctacatgaagtttgca
gatccctcagtgtttgtaaagaccactgatgacggagtggcgagagtgcggaagtctaaa
gggaaatacgcttatctgctggagtccaccatgaacgaatacatcgaacagcgcaaaccc
tgtgataccatgaaggtgggcggaaacctggactccaaggggtatggggttgcgactcct
aaaggttctgacctaagaaaccgagtaaacctggcagtgttaaaactgaacgagcagggc
ctgttggacaaattgaaaaacaaatggtggtacgacaagggcgagtgcggcagcggggga
ggtgattccaaggataagaccagcgccctgagcctcagtaatgtggcaggggttttctat
atcctgattggaggactggggctggccatgctggtggccttggtcgagttctgttacaag
tccagaatccagtctcggagaatgaagcaaatcatcgacgcagcaatgttgggctccagc
ctgagccgcatgggcagcggaggggagaacggccgtgtggtggctcatgattttcccaaa
gcagcacagactctgccctgcatgggccaagcagcgggcatgggcatcaacaccagcggc
atgtag
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