Pangasianodon hypophthalmus (striped catfish): 113541882
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Entry
113541882 CDS
T05759
Symbol
srsf5
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040
Spliceosome
phyp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113541882 (srsf5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113541882 (srsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113541882 (srsf5)
Spliceosome [BR:
phyp03041
]
Common components
Common spliceosomal components
SR proteins
113541882 (srsf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
OB_RNB
Motif
Other DBs
NCBI-GeneID:
113541882
NCBI-ProteinID:
XP_026794866
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCNERVTIEHARSRRGRGGGGGAGSRFSPRFGGYRQSRSAGSRYGPPVRTEHRIVVENL
SSRISWQDLKDLMRKVGDVTFVDAHRANKNEGVVEFASHSDMKNAIEKLNGTELNGRKLK
LYEDRKRSRSRSRSRSSSRSRSRSRSKSASRSRSREDKRESKREKRSRSRSRSASRTPEK
KTSAKSESRSRSRSPSPRKQSRSRSASTESQH
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgtgtgtttatcggccgtctgagccctcacgcccgggagagagacgtg
gagaagttcttcaagggttatggacgcatccgggagatcaacctgaagaacggctttggc
tttgtggagtttgatgaccacagggatgcggacgacgccgtgtacgagttaaacggaaag
gagctttgcaatgagagggtgaccatcgagcacgctcgctcccgtcgtggtcgaggaggt
ggaggaggagcaggcagccgcttctctccacgcttcggaggctaccgtcaatcacgcagt
gcaggatccaggtatgggcctcccgtgcgtacggagcacaggattgtcgtggagaatctg
tcgtcccgtatcagctggcaggacctgaaggacctgatgaggaaagtgggagacgtgacg
ttcgtggacgctcacagagccaacaagaacgagggggtggttgagttcgcctcacacagc
gatatgaagaacgccatcgagaagctgaacggtacagaactgaacggccgcaaactcaaa
ctgtatgaggaccgaaagaggagccgcagcaggagtcgctctcgcagctcctcccgttcc
cgctctcgctcacgctccaaatctgcgagtcgaagccgcagccgcgaggacaagcgcgag
agcaagcgtgagaaacgctctcgcagccgctctcgctcggccagtcgcacgccggagaag
aaaacatcagccaagtccgagtcccgctctcgctcccgctctccgtctcccaggaaacag
tctcgctctcgctcagcgtccaccgagagccagcactga
DBGET
integrated database retrieval system
