Pangasianodon hypophthalmus (striped catfish): 113541995
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Entry
113541995 CDS
T05759
Symbol
hif1a
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137
Mitophagy - animal
phyp04140
Autophagy - animal
phyp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113541995 (hif1a)
04137 Mitophagy - animal
113541995 (hif1a)
04148 Efferocytosis
113541995 (hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113541995 (hif1a)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113541995 (hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
HIF-1a_CTAD
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
113541995
NCBI-ProteinID:
XP_026795018
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MTSGATAEKKRQSCERRKARCRDAARCRRVKETEVFNQLANQLPLHHSITESLDKASIIR
LTLSYLHLRSALSTVMMGEQSELDTQWSASCLKALDGFLMILSQDGDVVYASETVSKCLG
IPQIDLSGQSVFDFTHPCDHEEIREMLVNRTGSCKKTRDEQSCLLRMKCTLTSRGRTVNL
RSATWKVLHCSGHIRVECTQNSVCEESGTTVSYLVLICEPIPHPASIEVLLDSRTFLSKH
TLDMRFSYCDERITQLLGYDPEDLLQCSVYEFYHALDSDSLTKTHHNLFVKGQACTGQYR
MLVKGGGFVWVETQATVIYNNKNSQPQCVICLNYVLSGVEEPELVLSLHQSAIKQEKEDG
CGTERETQSQEAVTRINEDRKEEKREGETELQADADVTLDFTNTGTETSVLKDAPLYNDV
MLPSTSVLSPLSPPTEPPCATLPRLDDLPFPSSSAPNSSGRGSTQAVEDLELEMLAPYIS
MDNDYQLHTHAHAEGSEYPHSGQKNTRKHTDPSGTQHREQPDEDLSSASRSSQKRKFETI
SLRHATGLVVTDSPQVKRSKVTVSEARPPAAMPETLTILLLPSDVLNQLVVGGAIIKPLP
HITRXGCEVDAPVTARRNLLQGGGRSFGTHRTEPAKDF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggagccacagctgaaaagaaaagacagagctgtgagcggaggaaggcgagg
tgtcgtgatgcggcacgctgtaggcgggtgaaggagacggaggtgtttaatcagctggcc
aatcagcttcctctccatcacagcatcaccgagagcctcgataaagcctcgatcatccgt
ctcacgctgagctacctgcacctgcgctcggccctcagcacagtgatgatgggcgagcag
tccgagttggacactcagtggagcgcttcctgtctgaaggccctcgacggcttcctcatg
attctctctcaggatggagacgtcgtttacgcttcagaaaccgtcagcaagtgtctgggg
attccccagatcgatctttcaggacagagtgtgtttgatttcactcacccctgtgaccat
gaagagatcagagagatgctggttaacagaacaggttcctgtaagaaaacgagagatgag
cagagttgcttgttgcgcatgaagtgcactctgaccagcagggggcgcaccgtcaacctc
agatctgctacgtggaaggttctacactgttccggtcacatccgcgtggagtgcacgcag
aacagcgtgtgtgaagagagcggtacgacggtgtcatacctggtgctgatctgtgaaccg
atcccacatccagccagcatcgaggttcttctagactccagaacgttcctgagcaaacac
acgctggacatgcgcttctcctactgcgacgaacggatcacacagttgttggggtatgac
cctgaggatctccttcaatgttctgtgtacgagttttatcacgctctggactcggacagt
ctcacaaaaacacaccacaacttgtttgtgaagggccaggcatgtacaggtcagtaccgt
atgctggtgaagggcggaggctttgtgtgggtcgagactcaggccaccgtcatttacaac
aacaaaaactctcaaccgcagtgtgtcatctgcctcaactacgtcctcagcggtgttgaa
gaacccgagctcgttctctctctccatcagtcagcgataaagcaggagaaggaggacggg
tgcgggacggagagagagacacagagccaggaagcagtgactcggataaacgaggacagg
aaagaggagaagagagagggagaaacagagttacaggctgacgctgacgtcacactggac
ttcacgaacacagggacagaaacgtcagtgctcaaggacgctcctctctacaacgacgtc
atgctgccctccaccagcgtcctgtcacctctgtctccgcccaccgaaccaccctgcgcc
accctgccccggctggacgacctccccttcccatcatcctctgctccgaactcgtccggt
cgcggttccactcaggcggtggaggatctggagttggagatgttagctccctacatctcc
atggataatgattatcagctccacacgcatgcacacgcagagggttcagagtatcctcac
tccggccagaaaaacaccagaaagcacacagatcccagcggtacacagcacagagaacag
ccggatgaagatctgtcttccgcaagtcggtcgagccaaaagagaaaatttgaaacgatt
tctctgcgtcatgccacagggctggtggtaacagactcacctcaggtcaagaggtcaaag
gtgacggtgtcagaggctcgtccaccagccgccatgccagagactctgactatactgctg
ctcccctcagacgtgttaaaccaattagtggtaggaggagccatcattaagcccctccca
cacatcactcgtntaggatgtgaagttgacgcacctgtcactgcgcggagaaacctgctg
caggggggcgggaggagcttcggcacgcaccgcactgaacctgcaaaagatttttaa
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