Pangasianodon hypophthalmus (striped catfish): 113542017
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Entry
113542017 CDS
T05759
Symbol
arid4b
Name
(RefSeq) AT-rich interactive domain-containing protein 4B isoform X1
KO
K19195
AT-rich interactive domain-containing protein 4B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113542017 (arid4b)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113542017 (arid4b)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
ARID
113542017 (arid4b)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
113542017 (arid4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
Tudor_2
MSL3_chromo-like
PWWP
Chromo
Motif
Other DBs
NCBI-GeneID:
113542017
NCBI-ProteinID:
XP_026795057
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MKTLEEPAYLTVGTDVSAKYRGAFCEAKIKTAKKLVKAKVTFKPDSSTAEVHDEHIRGNL
KVGAVVEVKNQDGIYQEATINKLTDASLYTVVFDDGDEKTLRRSSLCLKGARHFAESETL
DRLPLTNPEHFGTPVIGKKGNRGRRSNAIQEEESSSSSSEEEDGDPQQNEELYGKVVGVE
GVAPGDKKKTLWFPALVISPDCHEDVMMKKDSVFVRSFKDGKFHMVLRKDIKELDGEMDP
KTEASLKPALNAAWDFQCNGTVPSSWRTEVKDESSSSEENDEEDEEVQEDGGSSEEEEES
IGQLAAQLFHCQEEVEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLYRLV
HNLGGFDSIESGSIWKQVYQDLGIPVLNSAAGYNVKCAYRKYLYGFEDYCTSTGITFRMD
LPFKAVEKLISHTDCNTDGPAERTKSVEPKPDPERSLSTKNIVKEEKSEEVRLFRNKVNI
RSLKEEDRVCSDEEDNNIHKEPHKLKAEVAAPTEDSCTENVKAELCDDQNKELLRDDSSQ
EWEEGEEFECYPPGMKVQVRYGRGRNQKTYEATVKESDLEGGEVLYLVHYCGWNVRYDEW
IKADKIVRPANKNVTKIKHRKKIKNKTERERDRIESLNDREDLSPTNNRINRLSKPFSGS
DGFPKMEEFKDAGGQKSPVKSLKITSNLNGLQAPESSIDHSKHEQDEQGDHNNDCPAGQL
SLQRRASPESLYKAPQWESEPSSEGHKASVSMGTTEVSSSQYSPETNKQLVTEGEALSTR
RRKADGTTERTHKTQRKGKTRGSKLSDWLSESSLKKLEERNIGTLDGGMQSSSSSEDEGG
LLMESQAKEELLMHHKAKGAPSKKYNGLKEKAKGGRSSAFWEIPDKRAKMTSGMEDRTPG
CRTKGHKDVWSSIQAQWPKKTLKELFSDSDTEAANSPPPVVPGLGDLDPEPEQKSETREE
PQESQEKNQEYPSSGSNSILNTPPTTPESAEVLREMHSSSPPPQSSVLASCSPATSSPAG
PLTEECVGGRSESDTSTVEMDIVSCEFHTLPQEEQSESLSKAFDANLSSNSSCSLSLSSS
SQQESEQKSKVSSSNQKRHKNSQGGGASKKHKQSHKTLNLHPKKNHKTANSSDSEDQCLS
ESTAKSLMSKSSPQDVKAITPPKGSARTPPSHKYHKHGDSEHLHPKEQHRSSRGSRTYKW
SFQMSDLEKMSSLEKITFLQEKLQDIRNHYLSLKSEVASIDRRRKRMKKKERESKLEHIG
QTWESERNEGYHWAVVHHSGPCLMKSNLLHHQVSHMHVLQDHTATTEH
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgaagactctagaggagcctgcatacctgactgtcggcactgacgtgagtgccaagtac
cgtggggctttctgtgaggccaagatcaagacagccaagaaacttgtcaaggccaaggtg
accttcaaaccagactcatccactgctgaggtgcatgatgagcacatccgaggaaatctg
aaggtgggtgctgtggttgaagtcaaaaaccaagatggaatctaccaggaagctaccatc
aacaagctcacagatgctagtttatacacagtcgtttttgatgatggtgatgagaaaacc
ctgaggcgttcatccctgtgccttaaaggagcacgtcactttgctgagagtgagacgctt
gacaggcttcccctgaccaatcctgagcactttggtactcctgtcattgggaaaaaaggc
aaccgtgggcgtcgatctaatgccatacaagaggaagaatcctcttcctcatctagtgaa
gaagaagatggtgacccacaacagaatgaggaactttatggcaaggtggtgggtgtggaa
ggtgttgctccaggggataaaaagaagacattgtggttccctgcactggttatctctcca
gattgtcatgaggatgtcatgatgaaaaaagacagcgtgtttgtccgctccttcaaggat
gggaagtttcacatggttctgcggaaagacattaaggaacttgatggtgaaatggatcca
aaaacagaagccagcctcaagccagcactgaatgctgcatgggatttccagtgcaatggt
actgtgcctagctcgtggaggactgaggttaaggatgaaagttccagcagtgaagaaaac
gatgaggaggatgaagaggtgcaggaggatggtggcagcagtgaggaggaagaggaatca
attggacaattggctgctcagctattccattgccaggaggaggtggagcccttcccagag
gagagggagaatttcctccaacagctttacaagttcatggaggacagaggcacacccatc
aacaaaagaccagtgctgggctacagaaacctgaacctctttaaactctacaggctggtg
cacaatcttggaggatttgacagtattgagagtggatctatttggaaacaagtgtatcaa
gatctgggaatccctgtgttgaactctgctgcagggtacaatgtcaaatgcgcctataga
aagtatctttacggttttgaggactactgcacctcaacagggatcacgttccgcatggac
ctcccatttaaagcagtggagaagctgatttctcacacagattgcaatactgatggacca
gcagagagaacaaagagtgttgagccaaaacctgatccagagagatcactaagcacaaaa
aatattgtcaaggaggagaaatcagaagaagtgagactttttaggaacaaagtgaacatc
agaagcctgaaggaagaagaccgggtctgtagtgatgaggaagacaataatattcataaa
gagccccacaaactcaaagctgaagtagctgcaccaacagaagattcatgcacagagaat
gtgaaggcggaactatgtgacgaccagaacaaggaactgttacgggatgacagcagtcag
gagtgggaggaaggggaggagtttgagtgttacccccctgggatgaaggtgcaggtgagg
tatgggcgaggtcgcaatcagaagacgtacgaagccactgtgaaagagtcagacctggag
gggggagaggtgctctacctggtacactactgtggctggaatgtcaggtatgatgagtgg
attaaagccgacaagattgtccgaccagctaataagaatgttaccaaaataaagcatagg
aaaaaaataaagaacaaaactgaaagagaaagagaccgaatagagagtttaaatgacaga
gaggacctttctcctacaaacaatcgcatcaaccgactctcaaaacctttctctggcagt
gatggttttcccaaaatggaagaatttaaagatgcaggtggccagaagagtcctgttaaa
tccctcaagatcacctccaatctcaatggcctccaagcacctgagagctccatagatcac
agcaaacatgagcaggatgaacaaggtgaccataataatgattgtccagcaggccagcta
agccttcagagaagagcttctccagaaagcctttataaagccccacaatgggaaagtgag
ccatccagtgagggacacaaagcttcagtgagtatgggcaccacagaggtatcatccagc
cagtacagtccagaaacaaataaacagttagtaacagagggggaggccttgagcaccagg
agaagaaaagctgatggaactactgagcgtacacataaaacccaacgcaaaggcaaaacc
aggggtagcaagttgagcgattggctgtcagagagttcacttaagaagctggaagaaaga
aacattggtactctggatggaggcatgcagtccagcagcagttctgaggatgagggtggt
cttcttatggaatcccaggccaaagaagagcttctaatgcaccacaaagccaagggtgcc
ccttcaaagaagtacaacggcctgaaggaaaaggccaagggtggtcggtcttcggcattc
tgggaaatccctgacaagcgagctaaaatgacatctggaatggaagacaggacacctggc
tgccgtaccaaaggccataaggatgtatggtccagtattcaggcccagtggcctaagaaa
accctgaaagagttgttttctgattcagacactgaagctgcaaattctcctcctccagtg
gtacctggactgggtgacctggatcccgagcctgagcagaaaagtgaaacacgtgaggag
ccacaggagagccaagaaaagaaccaggagtatcccagcagtggaagcaactccatcctc
aacacaccacccaccacgccagagtctgctgaggtcttgcgtgagatgcactcatcctca
ccaccccctcagagttctgtcctggcatcttgctctccagccacatcctcaccagctggg
cctttgacagaagagtgtgttggtgggcgcagcgagtctgacactagtacagtggagatg
gatattgtgagctgtgagtttcacacactgcctcaggaagagcagtcagaatccctctcc
aaagcttttgatgcaaacctgtccagcaacagcagctgtagcctgagtttaagcagcagc
agtcagcaggagagtgagcagaaatccaaagtctcatcatccaatcagaagcggcataaa
aactcccagggaggtggagcgtcaaagaaacacaaacaaagtcacaaaaccttgaacttg
catcccaaaaagaaccacaaaacagccaacagcagtgacagtgaggaccaatgtctcagt
gagagcactgccaaatcacttatgtccaagagcagcccacaggacgtaaaggccataaca
ccacccaagggctctgctcggacaccgccatctcataaataccacaaacatggggactct
gagcatctgcatcccaaagaacagcatagaagcagccggggttcccgcacttacaagtgg
agttttcaaatgtctgatttagaaaagatgagtagcctagagaagataacattccttcag
gagaaattgcaagatatcaggaatcactatctctcactcaaatccgaagtggcctccatt
gacagaagacgaaagcgtatgaagaaaaaagagcgggaaagcaagctagaacacattggt
cagacgtgggagagcgagaggaatgagggatatcattgggctgttgtacatcacagtggt
ccttgcttgatgaagagcaaccttttacatcaccaggtgtcacatatgcatgtactacaa
gatcacacagcaacaactgagcattaa
DBGET
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