Pangasianodon hypophthalmus (striped catfish): 113542035
Help
Entry
113542035 CDS
T05759
Symbol
trip11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113542035 (trip11)
Membrane trafficking [BR:
phyp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
113542035 (trip11)
Retrieval pathways
113542035 (trip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CCDC39
DUF4407
Mod_r
TMF_DNA_bd
SlyX
Motif
Other DBs
NCBI-GeneID:
113542035
NCBI-ProteinID:
XP_026795093
LinkDB
All DBs
Position
Unknown
AA seq
1989 aa
AA seq
DB search
MASWLGGLGSGLGQSLGQVGGSLSSFTGQISNFTKDILLEGAEEVGDAATELHVSNSKLL
ELEAALSAQKSEYERLRRINAELEEKLEAAEIQIKQQSVEYRTILQQKEVDISHLKARQN
SLQEEVQKLRLCAQDVSSSTSDPAMLPVTTVATTTSSSSFLSRPSAGHHGFHGDEVDLSD
VLWSQQEINRLSHEVQRLEADVAHWRRVAQASKVSGAEKGDHGEVLQLQRTIKELREQMG
REVDEHQHELAALQDAHRQKMADMAKRHRDELAEYEERIEELEEQIQSGAAATLPTPAAG
AAAAAASLDSSKLEELQATIRSLREEAELQNTKCSELAASLEEARRQGAELQREKEEAKA
ENSELLQNYARLQSSVSELQTRVQEQESKAMVKAQHDGEIHALRKALTDAEKEVSRLKSL
AEINQSAEVEHADILELNTVIDALRTEKEEVEKEKAALVEKLRLAENRATSSEAEISEDL
QLEATDLKNQLEQREKALKQAHVSVDTLTAELEELDRQNQEATQHLIAMKDQLAAQKFQA
EAEITRLKSELTASLGQKDALRQELEAQKEKLSQSAFTLNDLHMGKQQLEATVRELRDKL
KKSQELGKETRVEASDLKKLLQERETQLDALRQELSQAGEQGDEVKGQMKVLEEKEKEIQ
DLRRELAELKVLYEKVSSEDFELKIENRKLKEDSIQALEKVENLDRQLQDGQTSLSRVVL
EKDTRIEALKLEKNQLEVELSQAENRLLDQAKQYQQTIEELTRARSLDASALQMEHERTV
KLNQEKDLMIAQLKREMEQMAADHKDTSEMLDITVAGQKQLTDLLQEKDAFAASLKAQAD
EAQKDLEVGISQARQESDALRKVVEEKDKQLGAMKEKNSHLKEEIDRLKDQQSRPQLMSE
PRTLDIITELETEVAQLKAARDRFEEEAKTLRATSEQQRESLIQSQHTLQVHQSELEQAR
SRHEQSTLNYEKLIGAKDEEIARLQEEMERLSVQSQPQTVEILQEDKTRSLSGENGNEKH
DLSKVEIEKLVKGIKEKETEIFQLNEKNRSLTKQLDQLVVSRDELGKLSQIVLQKDLEIQ
ALHARVSGGYSQDVLLLQQQMQAYAVEREQVLAVLNEKARENSHLRSEYHRIMEIIAAKE
SALLKLQQENQRLSTMSDPSGSQEMFRETIQNLSRIIREKDIEIDALTQKCQTLVTVLQA
SGGDSGSGGSGGVSSNQFEELLHERDNLKQQVKKMDEWKQQVITTVKNMQHESAQLQEEL
LKLQGQVSADNDCSSKLSVDYSRLIQSYEQKEKRLGSLSQELAQVQQTISQLSTTKDVLL
GKLDSVTQVPDISAQSVQTVGHQVAQDAPPKLPVVQDENLRQELESLKRVLAEKESMLRT
LQENNHRLSNSASLSESEQRGHAEELRQARERMETLQRSLREKDLLIKTKGDHLNQVSET
LRNRENDNEVLKQAVTNLKERALILELDVKKLKEENEAVTVKSREKETEFRALQETNMQV
SLMLREREFECSTITEKAAAMETLLKEKEQGKTGELNQLLNEVKSMQEKALAFQQERDQV
MLALKQKQMETSALQSELQHTRDKEQRQKLELERLRNHLLEIEDSYTREALAAEDRESEL
RRRVAMLDEKLASSSSAVESASQQASLQVESLQEQLIVMARQRDEALLQLHAAQEQVKQY
AVSLSNLQMVLEQFQQEEKAMYSAELEKHKKEKEEWRRKADMLEDTASALQLNLDEANAA
LESASRLTDQLDLKEEQIEELKKQVEVRQEMLDEAQHKLTDLLNSTEGKVDKVLMRNLFL
GYFHTPRNKRAEVLRLMGSVVGLERDDVDKMLEEEVRKGVTGWVSGWLGGSRAVQSVPTT
PQRPTHTHNLNGSFSEMFVKFLEVESTPAAPAPKLPVYDIKPLNAPPPGRNAAGATATGS
SGGGKRSVDSNPFLAPRSAAVPLLTAGGGGAAGGHLLMKPISDALPTFTPVPVAADASAG
AVLKDLLKQ
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctggctggggggtttgggctcgggcctcggtcagtctctcggtcaggtcgga
ggaagtttatcctctttcaccggacaaatctccaatttcaccaaagacatccttctggaa
ggagcggaagaagtcggagatgctgccaccgagctgcacgtgtccaactcgaagctgctg
gagctggaggcggctctttctgcacagaaatccgagtatgaacgcttgaggagaataaac
gccgagttggaggagaagttggaggcggcggagatccagatcaaacagcagtcggtggag
tacaggactatactgcagcagaaagaggtggacatcagccacctaaaagccagacaaaat
agtttacaggaagaagtccagaagctccgactgtgcgcccaggacgtctcgtcttccact
tccgatcctgccatgcttcccgttacgaccgtcgccaccaccacgagctcctcctccttc
ctgtcccgcccctcagcaggccatcacggtttccacggcgacgaggtggacctgagcgac
gtcctgtggtcacagcaggaaatcaaccggctgtcccatgaggtgcagcgcctggaggcg
gacgttgctcattggcgaagagtggcccaggcatctaaagtgtcaggagcggaaaaaggt
gaccatggggaagtcctgcagctgcagagaaccatcaaagagctgcgagagcaaatgggc
cgtgaggttgacgagcaccagcacgagctggcagcgctgcaggacgctcatcggcagaaa
atggcggacatggcgaagaggcacagagacgaactggcagagtatgaagagaggatcgag
gagctggaggagcagattcagagtggagctgctgcaaccctccccactccagcagcagga
gcagcagcagcagcagcatcactggattcctccaaactggaagagctgcaggctacgatt
cgctccctgcgtgaggaggcggagcttcagaacacaaagtgcagcgagctagcggcgagt
ctcgaggaggcccggcgccagggggcggagcttcagcgagagaaggaggaggccaaggcg
gaaaactctgaacttctgcagaactacgctcgactccagagttctgttagtgaacttcag
actcgggttcaggagcaggagagcaaagcgatggtcaaagcgcagcacgacggcgagata
cacgctctgaggaaagcgctcacggatgctgaaaaagaggtgtccaggttgaaatctctc
gctgaaataaatcagagcgctgaggttgaacacgcggacattctggagctcaacacagtc
atcgatgcgctcagaacggagaaggaggaagtagagaaagagaaggcagcgttagtggag
aaactccggctagctgagaaccgggccacgtcgagtgaagctgaaatctctgaggacctg
cagctcgaagctacagacttaaagaaccagctggagcagagagagaaagctttaaagcaa
gcacacgtcagcgtggacacgctgacagcagagctggaagaactcgaccggcagaaccag
gaggccacgcagcatctcatcgctatgaaagatcaactcgctgcacagaagtttcaggct
gaagctgaaattactcgtctaaaatcagagcttacagcgtcactcggtcaaaaagacgcg
cttcgtcaggagttggaggctcagaaggagaagctcagccaaagtgcctttaccctcaac
gacctacacatgggcaaacagcagctggaggccacggtaagagagctgagggacaaacta
aaaaaatctcaggagcttggcaaggagacacgtgtagaggcgtccgacctgaagaagctg
ctgcaggaaagagagactcagctggatgctcttcgtcaggagctgagtcaagcaggggag
cagggggatgaggtaaagggtcaaatgaaggttctggaagaaaaggagaaagaaatccag
gatttgagaagagagctggcggaattgaaggtcttgtatgagaaagtgtcatctgaggac
tttgagttaaagatagagaacaggaagttaaaagaagacagcattcaggctcttgagaaa
gtggagaatttggatcgacaactacaggatggccagacctctctgagcagagtagtcttg
gagaaagacactcgcatcgaggccttgaaactggagaagaaccagctagaagttgagctg
agtcaagcagagaaccggcttttggatcaggccaagcagtaccagcagaccatcgaggag
ctgactagagcacgatccttggatgcctctgcattgcagatggaacacgaacgtactgtg
aagctaaaccaggaaaaggacctgatgatcgcccagctaaagcgcgagatggagcagatg
gcggccgaccacaaagacaccagtgagatgttggacatcaccgtggctggacagaagcag
ctcaccgatcttttacaggagaaggacgcttttgcagcgtcattaaaagctcaagctgat
gaagcgcagaaggatttggaggtcggtatctcgcaggcaaggcaggaaagtgacgcacta
aggaaagtcgtagaagagaaagacaagcaactaggggccatgaaggagaagaacagtcac
ctgaaggaggaaattgatcgtctgaaggatcagcagagtagaccgcaactgatgtccgag
ccaaggacgctggacataatcacagagctggaaaccgaagttgcacagctcaaagctgct
agagacagatttgaggaagaagcaaagactttgagggcaacatcagaacaacaacgggaa
tcgcttatacaatctcaacatacgttacaggtgcaccagagtgaactggagcaggctcgg
tcgagacacgagcaaagcaccctcaactacgaaaaactgatcggcgctaaggatgaggaa
atcgcgaggctgcaggaggagatggaaagactcagcgtacaaagtcaacctcagactgtg
gaaatccttcaggaggacaagactcgttctctcagtggcgagaatggcaatgagaagcat
gacttgtcgaaggtggagatcgaaaaactcgtaaaaggcatcaaggagaaagagactgag
atattccagctaaacgagaagaaccgctccttgaccaaacagcttgatcagcttgtggtc
tctcgcgatgagcttggcaaactttctcaaatagtgcttcagaaggatctagaaatccaa
gcgcttcatgctcgtgtttcgggtggatatagccaggatgttctcttgcttcagcagcag
atgcaagcttatgcagtcgaacgagaacaagtgcttgctgtactgaatgaaaaagcgcgt
gagaatagccacctgcgttcggaataccatcgcatcatggaaatcattgcagccaaggaa
tcggcgttacttaagcttcaacaagagaaccagcgcctgtccactatgagtgacccttct
ggaagtcaggagatgttccgagagaccattcagaacttgtcccgaatcatccgtgagaag
gacatcgaaatcgatgctcttacacagaaatgccaaacattggtcactgtccttcaggca
tccggtggagactctggaagcggcggttcaggtggtgtgagcagcaatcagttcgaagag
cttttgcatgagagagacaacctcaagcagcaggtcaaaaagatggacgagtggaagcaa
caggtgatcacaactgtgaagaacatgcagcacgaatctgcccagcttcaggaagagctt
ctcaaactgcagggccaggtgtctgctgacaatgactgcagctccaaactttcggtcgac
tattccagactcatacaaagctatgagcagaaggagaaaaggctgggcagtttgagtcag
gaacttgcccaggtacagcagaccatcagccagcttagcaccactaaagacgtcctgctt
ggaaagctcgacagcgttactcaggtcccagacatttccgcacaatctgtccaaactgta
ggtcatcaggttgcccaggacgcaccaccgaaactgccagttgttcaagatgagaacttg
cgacaagaactggaatcgttaaaaagggtgttagctgagaaggagagtatgttgagaacg
cttcaggagaacaaccatcgcttgtcaaattcggcgtctttgtcagaaagcgagcaaaga
ggccacgctgaggagctcaggcaagcacgcgagaggatggagaccctgcagcggtccctc
cgagaaaaagacctgcttatcaagaccaaaggagaccatctgaaccaagtgagtgaaacg
ttgcgcaaccgtgaaaacgataacgaggtcctgaagcaggccgtcacaaacctgaaggag
cgtgcgctgattctcgagctggacgtcaagaagctgaaggaggagaacgaagccgtgacg
gtgaaatcacgagagaaagagacggaatttcgagctctgcaggagaccaacatgcaggtg
tcgctgatgctgcgggagcgagagtttgagtgcagcaccatcaccgagaaagctgcggcc
atggagacgctgctcaaagaaaaagagcagggtaagactggcgagctgaaccagctgctg
aatgaggtaaagtccatgcaggagaaagcgctggcgttccagcaggagcgagaccaagtg
atgctggctcttaaacagaagcagatggagacttctgccttacagagtgagctgcagcac
actcgcgataaagagcagaggcagaagctggagttggagcgtctccgcaatcacctgctg
gagatcgaggactcgtacacgcgggaggcgctcgcggccgaggaccgggagagcgagctc
agacgcagggtggcgatgctcgatgagaagctggcgtcgtcctccagcgccgtggagagc
gccagtcagcaggccagtctgcaggtggagtctcttcaggagcagctgatcgtcatggcc
aggcagagggacgaggctttgcttcaactccatgctgctcaggaacaagtgaagcagtac
gcagtatctctgtccaacctgcagatggtgctagagcagttccagcaagaggagaaagcc
atgtactcagcagaactggagaaacacaagaaagagaaggaggagtggaggaggaaagca
gacatgctggaggatacggcctccgccctgcagctgaatctggatgaggcgaacgccgcg
ttagagtcagcttcccgcctcactgaccagctcgacctgaaggaggagcagatcgaggag
ctgaagaaacaggtggaagtgagacaagagatgctggatgaagcccagcacaaactgact
gatcttctcaacagcactgaaggcaaagtggacaaagtgctaatgaggaatctgtttctt
ggatatttccacacgccgagaaacaaacgcgccgaagtgctgagacttatgggtagtgtg
gttggattggaacgagatgatgtggacaagatgttggaggaggaggtgaggaagggagtc
acaggttgggtgtcagggtggttaggaggcagcagagcggtgcagagtgtccccaccaca
ccccaaagacccacgcacacccacaacctgaatgggtctttctccgagatgtttgtgaaa
ttcctggaagtggagtccactccggctgctcccgctcccaaactgcccgtttacgacatt
aagcctctgaatgcgccccctcctggccggaacgctgccggtgcaactgcaacaggctct
tcaggcggcgggaagcgcagtgtggactcgaacccgttcctggcccctcgctctgcggct
gttccactgttaacggcgggcggcgggggggccgcaggtgggcacctgctcatgaagccc
atctcagacgctctccctacgttcacgcccgtgccggtggcggctgacgccagtgccggg
gcggtccttaaggacctgctcaaacagtga
DBGET
integrated database retrieval system
