Pangasianodon hypophthalmus (striped catfish): 113542133
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Entry
113542133 CDS
T05759
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113542133 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113542133 (herc3)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113542133 (herc3)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
HECT type E3
113542133 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
113542133
NCBI-ProteinID:
XP_026795279
LinkDB
All DBs
Position
Unknown
AA seq
1061 aa
AA seq
DB search
MLCWGSSAWGQLGLAVSEAAVFEPRSCCVFDGRGLKEAACGGQHSLFLMHDGSVYTCGSN
SHGQLGHEKPGLKPELVGALDAQKIAGVACGQAHSLALSEQGQVFAWGAGEWGQLGLGTA
EEAVRVPRLIKKLCDHQISQVMCGNQHCIALSKDGQLFTWGQNSSGQLGLGKGEPSSLSP
QPLKSLCGIPLAQISAGGDHSFALSLSGAVFGWGRNSAGQLGLNDEQDRAVPCHIKFLRS
QKVVYISCGEEHTAALTKDGGLFMFGNGSRGQLGHGSTNNEPLPRRVLELMGTEVSQIAC
GRHHTLAFVPSTGSVYAFGCNAQGQLGLGTRGNAMIPLPVRNIQPPFLTNTQTGTDQYSI
SRIHCGGDHSFLLLSHGKSCPDDFRVINTSKSISLINKESLNSWRLKLLDSTDSSITNDI
ILLLSSTACWNASFLDQSDDGHFKTNPKVPGIDLNSVRLLFEILMKPAYSRLLEQTTKSF
ESLLIPQLPCSPPDVEAMRIYLILSECPALHDSKNYISLTIPLAMAILRLDANPSKVLDN
WWSLLDSEVFSRLVEMYKSIVVFLLTGGKALLIPVFLESYISATLKLLEKLHKVNQKAHH
VEYNCFYIPDITSLVDIQEDYLKWFLSKAEIKMQSPPVQNSVTLCAYPFILNAQAKATML
QTDAELQMQMAVRGANLHNMFMLLTLEPLLVQNPFLVLHVRRDHLVSDALRELTIYNDVD
LKKPLKVIFDREEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYPESNLLWFSDKCFVEHN
WFHLIGIVCGLAIYNSTVVDLHFPLVLYKKLLDVCPVLDDLKELSPTEGRSLQQLLDYEE
DDIEDTFCLNFAISREYYGVTEVKELVPGGENKTVDKSNREEFVQAYLHYVFSESVRELY
SAFASGFLKVCGGRILSLFQPSELMAMVVGNSSYNWEELEKNASYKGEFSASHPTVRMFW
EVFHEFPLEKKKQFLRKCLGAQCYYSCCSVWFSVQTYTLVQRGVVDYRGNIRKVSTEEKL
RLLCTSGKLAHRANSCSCPVSQSCSSSAVFKIMPIRVKSFC
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggcagttcagcttggggtcagttgggcctcgctgtatccgaggccgct
gtgtttgagccgcggagctgctgcgtgttcgatggcagagggctgaaagaggcggcatgc
ggcgggcagcactcgctcttcctaatgcatgatgggagtgtttacacatgtggctccaac
agtcacgggcagctgggccacgagaagcctggactcaagcctgagctggttggggcgctg
gatgctcagaagattgcaggtgtggcgtgtgggcaggcccactctctggcactgagcgag
cagggccaggtgtttgcgtggggcgcaggcgagtgggggcagctcggtctcggcactgca
gaggaagctgtccgggttccccgattgattaagaagttgtgtgatcatcagatctcacaa
gtcatgtgtggcaaccagcactgtatcgcactttctaaagatggtcagttgttcacgtgg
ggtcagaactcgagcggtcagctgggtttggggaaaggtgagccgagctctctgtctcct
cagcctctcaagtctctgtgtgggatcccactggctcagatcagcgctggaggagaccac
agcttcgccctgtctctctctggagccgtgttcggctggggcaggaacagcgccgggcag
ctgggcctcaatgatgagcaagatcgggctgttccctgccatattaaattcttgcgctca
cagaaagtggtctacatcagctgcggggaggaacacactgccgctctgaccaaggatgga
ggtctgtttatgtttggaaatgggtcgagaggacagctggggcacggctccaccaacaac
gagcctctgccacgcagggttttggagctcatgggcaccgaggtgtcccagatcgcctgt
ggcagacaccacacgctggcgtttgtgccctccaccggctcggtgtatgcgtttggctgt
aatgctcagggccagctcggcttagggaccagaggaaacgccatgatccccctaccagtc
cgaaacatccagcctccttttctcaccaacacacaaacaggcacggatcagtacagcatc
agcaggattcactgcggaggcgaccacagctttctgttgctgtcacatggcaagagttgc
ccggatgacttccgcgttatcaacacatcgaaaagcatctccctgattaataaggagagt
ctaaacagttggaggctgaagctcctggacagtactgactccagcatcacaaatgacatc
attctgctgttgtcctcgaccgcatgttggaacgccagcttcctggaccagagtgatgat
ggtcattttaaaaccaaccccaaagtccccggaatcgacctcaactcagtcaggctgctg
ttcgagatcctgatgaagccagcctactcacggctgctggagcagaccacgaagagcttc
gagagtttgctgatccctcagctaccctgctctcctcctgacgtagaggccatgcgcatc
tacctgatcctctccgagtgtccggctctgcacgactccaaaaactacatctccctcacc
attccactcgccatggctatcctccggctggacgccaaccccagcaaagtgctcgataac
tggtggtcactgctggacagtgaggtcttctccaggttggtagagatgtataagagcatt
gtggtgttcctgctcaccggtggcaaggccctccttattcctgtgtttctggagagctac
attagtgctacgctgaaactgctggagaaactacacaaggtgaaccagaaagcccaccat
gtggagtacaactgcttctacatccccgacatcaccagcctggtggacatccaggaagac
tacctcaaatggttcctaagcaaagctgagattaaaatgcagtctcctccagtacagaat
tcagttacgttatgtgcctatccgttcatattgaacgctcaagctaaggcaaccatgttg
cagacagatgctgaactgcagatgcagatggcagtgagaggggccaacctgcacaacatg
ttcatgctgttaaccctggaacctttgctggtacaaaacccgtttctagtcctgcacgtg
cggagggatcacctggtcagcgacgcgctgcgtgagctcaccatctataatgatgtggac
ttgaagaagcccctaaaggtgatttttgatagagaggaggcagtggatgcaggaggagtc
actaaagagttcttcttactactgctgaaagagctgatggatccagtctatggcatgttc
acccactacccagaatccaacctgctctggttctctgataaatgttttgttgaacacaac
tggttccacttgattgggatcgtctgtggcctggctatctacaactccaccgtggtggac
ctgcacttccctctcgtgctctacaagaagcttctagatgtttgtcctgtgctggatgac
ctgaaggagctgtcccctactgagggcaggagtctccagcagctgttggactatgaggag
gatgacatagaggacaccttctgtctcaactttgctattagccgggagtattatggggta
acagaggtgaaggagctcgtccctggaggagagaacaaaacagtggataagtccaacaga
gaggagttcgtgcaggcctatctgcactacgtgttcagtgagtcagtacgagagctctac
tctgcgtttgccagcgggttcctgaaggtgtgtggtggccggatcctctctctgttccag
ccctctgagctcatggccatggtggtgggcaacagcagctacaactgggaggagctagag
aagaatgcgagctacaaaggcgagttctcggcctcccatcctacagtgcggatgttttgg
gaggtgttccacgagtttcccttggagaaaaagaaacagttcttacgtaagtgtctcggt
gcgcagtgttattactcatgctgtagcgtgtggttcagcgttcagacttacacccttgtg
cagagaggagtggtggactacaggggaaacatcaggaaagtgtcaactgaagagaagtta
aggttattgtgtacaagtggaaagctagctcacagagctaattcatgcagctgtccagtc
agccagtcatgtagcagcagtgcagtgtttaaaatcatgccgatacgagtcaaaagcttc
tgttaa
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