Pangasianodon hypophthalmus (striped catfish): 113542251
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Entry
113542251 CDS
T05759
Name
(RefSeq) gasdermin-E-like
KO
K22146
gasdermin-E
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
113542251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113542251
Transporters [BR:
phyp02000
]
Other transporters
Pores ion channels [TC:
1
]
113542251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
113542251
NCBI-ProteinID:
XP_026795440
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MFAKATRKFVDEIDPDGCLIPVSRRNESDNLTVFSLVIKRNPFWFWQKPKYMPTDFTLND
VLLGDNPINPVLIETDFLKYNGTMENNKTGGAEAGVGPGNLNFEGKGSSKLASSFGNLKK
EELDVQKLLHDSKNRCLDFQHSLLKQTLQRRSEVFALVKERIITTQTCTVTEELQERGSC
SAFLGFTVPKKIQVSVKNGSLHSDSNVLVEIPAKTALAYSLMELNVKKTGQFELCLMPDT
YGSIEVDGVHTTNTTLLCSAPSASPFQKLQEELDKLQVQFKMLSGLPTSTRSCLFQQITL
LLKDKTAISTLDLALEDLLHGKKSDLSTLDKEPSLKKAVQTTLELLKEKEDADHPPLEGV
TPEQQSEPSALTATNVITSALEGMTESALSALESCCRCPNIQALYLLVQNFMGNKECSMK
DSTLAPLAEKDTYSKVQELFGSSNVTLSKEEDLIQAQISSQEGHFPLILCIAIFGLASLV
PPTD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgaaagcgaccaggaaattcgtggatgagatcgaccccgacggctgtttaatc
cccgtctcccggcggaatgaatcggataatctgactgtcttctcgctggttatcaagcgg
aatcccttctggttctggcagaaacccaaatacatgcccacagacttcaccctgaacgat
gtgctgctcggggataatcccatcaatccagttctgatcgagacagactttttaaagtat
aatggtacaatggaaaacaacaagactggaggagctgaagcaggtgttggtcctggaaac
ctgaacttcgaaggaaagggttcatcaaaactggcatcttcatttgggaatcttaagaag
gaagaattggatgttcaaaaactactacacgactctaaaaatagatgtctggattttcag
cactccctgttaaagcagacactgcagcgacgaagcgaggtgtttgcgctggtaaaggag
cgaatcataaccacacagacctgcactgttactgaggaactacaggagagaggcagctgc
tcagcctttcttgggttcactgttcccaagaagattcaggtttcagtaaagaatggcagc
cttcattctgacagtaatgtgcttgtagaaatcccggctaagacggccctggcttacagt
ttaatggagctcaacgtgaagaaaacggggcaatttgagctgtgtctgatgccagacacc
tacggatccattgaggtggacggcgtgcacacaacaaacacaaccctgctctgcagcgct
ccatctgcatcaccattccaaaagttacaggaagagttggacaaactgcaggttcagttc
aagatgctttcaggactccctacaagcacacgctcatgtctcttccagcaaatcactctc
ctcctgaaggacaagacagccatcagtaccctggaccttgcattggaggatttgctccat
ggtaagaagtctgatctgtccacgttggacaaagagccctctctgaagaaagcagtacag
actacactggagctgctcaaggagaaagaagatgcagatcatcccccactggaaggagtc
accccagaacaacagtcggagccctccgcccttactgccaccaatgtcatcaccagtgcc
ttagaggggatgactgagtcggcgttgagtgcgcttgagtcctgctgccgttgccccaac
atacaggcactgtacctgctggtgcaaaattttatgggaaacaaagagtgctccatgaag
gatagcacactggccccgttggctgaaaaggacacttacagcaaggtacaagagctcttt
ggatcttccaatgtgacactgtccaaagaggaggacttgatccaggcccagatcagcagc
caggaggggcactttcctctcatcttgtgcattgccatctttggtttggcctctttagtg
cccccaactgactaa
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