KEGG   Pangasianodon hypophthalmus (striped catfish): 113542262
Entry
113542262         CDS       T05759                                 
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03022  Basal transcription factors
phyp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113542262 (gtf2h3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    113542262 (gtf2h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phyp03021]
    113542262 (gtf2h3)
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113542262 (gtf2h3)
Transcription machinery [BR:phyp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     113542262 (gtf2h3)
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     113542262 (gtf2h3)
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 113542262
NCBI-ProteinID: XP_026795454
LinkDB
Position
Unknown
AA seq 302 aa
MASEDEISLLVIVVDVNPIWWGQQSQRQPEFTLSKCLDAVIVMANSHLVMTRTNKLAIIA
SHCQENHFLYPSKYWKAGDAAGDHAAAPATGDGKYELLSVADDVIAEEIRNLMARTQVRG
HQTDTLLAGSLAKALCYIHRVSKELEAGQDMKSRILVIKAAEDCALQYMNFMNVIFAAQK
QNVLIDACVLDSDSGLLQQACDITGGLYLKIPQKTALAQYLLWVFLPDADQRSQLVLPPP
VHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIPLPQMMKPKKKKLKA
AN
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcatcagaagatgagattagtcttctggtcattgtggtggacgtcaaccccatctgg
tggggtcagcagtctcagagacagcctgagttcactctgtcaaaatgtctggacgcagtg
attgtcatggcgaactctcacctggtgatgactagaaccaacaaactggccatcatcgct
agccactgtcaggagaatcactttctatacccaagcaagtactggaaagcaggagatgct
gccggggatcatgcagccgcgcctgcaactggagacggcaagtacgagctgctgtctgtc
gctgatgacgtcatcgctgaagagatcaggaatctcatggccagaacgcaagtgagaggc
caccagaccgacacgttactggctggatccctcgccaaagctctctgctatattcatcga
gtgtccaaggaactggaagctggccaagacatgaaatcaaggatattggtgataaaagca
gctgaggattgtgctctgcagtacatgaacttcatgaatgtgatctttgctgcacagaaa
cagaatgtcctgattgatgcgtgtgtgctggactccgattcaggccttttgcagcaggct
tgtgatataactgggggtctatacctaaagattccccagaaaactgctctggcacagtat
ttgttgtgggttttcctgcctgacgcagatcagcgttcacagttggtgcttcctccgccg
gtacacgttgactacagagcggcctgcttctgtcaccgcaacctcatcgagatcggctac
gtctgctcagtgtgcctgtcaatattctgcaactttagtcctatctgtacgacatgcgag
acggcctttaagattcctctgccacagatgatgaaaccgaagaaaaagaaacttaaagct
gcaaactga

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