Pangasianodon hypophthalmus (striped catfish): 113542309
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Entry
113542309 CDS
T05759
Symbol
col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
phyp00535
]
113542309 (col14a1)
Proteoglycans [BR:
phyp00535
]
Extracellular matrix (ECM) proteoglycans
Others
113542309 (col14a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_Dep-1_2nd
FN3_Tor_3rd
VWA_3
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
113542309
NCBI-ProteinID:
XP_026795530
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MQVVRLRMTALWPLIFLALMQFADPTKGQIAGPRRLRFKVMGPDKLYVLWKEPKGEYNGY
RFIYNSVPDGERNELRIGKGQTKAIINDFNPTKEYKVKVIAVSGSQQSRALEGSFGAQGR
EFERENTQPPRIKEMPTEDGIELSGVDQFVCTTSAIADIVILVDGSWSIGRLNFRLVRTF
LENLVNAFDVEIDKTRIGLAQYSGDPRIEWHLNTFTTKDSVIDAVKNLPYKGGNTLTGLA
LTYILKNSFKPESGSRSNVPKIGILITDGKSQDAVDSPAQSLKDAGVELFAIGVKNADEN
ELKVIASEPHDTHTYNVADFSIMNTIVEGLTRTVCEGVEQQDKEIRRDSVPEDTLNSPQD
LVTSEVTARSFRVSWTHAPGSVQKYRVIYYPSKGGQPEEVVVEGTETSAVLKDLSSLTEY
EIAVFAVYAASASEALRGSETTLALPVVSGLELYDVTQHTMRARWRPTEGATGYMLVYAP
LISETIDETEVKVADTVTDFGLVGLSPDTEYTVTVYAMFGDEASDPATMQETTLPLKAPR
NLRVTEVDHNSVRLNWDAPSSTVKGYRLKYVKSNGAQTNEVDTGPVSNVYLRNLASQTEY
TVSVFAVYDGDQSEPLKGVFTTKLVPAPRSIKIDEVTPNSFRVSWTQPGDGVELYKLAWR
SLGGGDTKEVVVPGNINTYVVNDLSPLTEYEVLLSAVYRDEAESSAVPALETTLPMPATT
AFPSTTPPVMRLGVTNVLVDDETTNSLQVSWDIDDADVEQYRVTYVSQRGDRAEESVLVR
GSRKSVILQPLLSDTEYKITVNPIYPEGEDSAFSQSSVGRTLPLTAPSNLRVSEEWYNRF
RLTWDTPASPTMGYRIIYQPTSVSGPALETFVGEDVNTLLILNLLTGTEYSVKVISSYTT
GSSEPLTGTAKTLFLGVSGLSTYQVQMNSMCAQWQPVSQASLYRVTIESLLNGHRQEHSL
SGGASRQCFFNLSPNTQYKISVYTQLQNMEGPAVTIMDTTFPAPTQPPTPPPTTAPIPTI
PSAKEVCKAAKAELVFLVDGSWSIGDDNFQKIIRFLYSTTGALDIIGREGTQVAIVQFSD
DARTEFKLSSYRDKESLLDAVQRITYKGGNTKTGRAIKHVKESIFTEEAGVRRGIPKVLV
VLTDGRSQDDVNKISKDLQTEGYIIFAIGFADADYGELVNIASKPSEKHVFFVDDLDAVS
KIEEQLITFVCEAATATCPSLLMSGNTLAGFRMMEMFGLVEKDYSNVQGVSMEPGTFNSF
PCYRLHKDALISQPTKYLHPEGLPSDYTVSVLFRILPETPQEAFALWEILNKANEPLVGL
ILDNGGKTLTFFNYDYKGDFQTVTFEGPDIRKIFYGSFHKLHVAVSKTSAKIVIDCKIVD
EKPISAAGNITTDGMEVLGRMVRSRGSRDNSASFQLQMFDIVCSTSWASRDKCCELPGLR
VEQDCPALPHACTCSQDSKGPPGPSGPPGGPGIRGSRGDRGEPGSVGPQGPTGEIGPPGP
QGPPGPQGPSGLSIQGSPGSAGEKGEKGDQGLPGPQGVPGASGGPGRDGLPGQRGLPGKD
GSQGQQGPPGPIGSPGAPGAPGTTGPPGPHGDHGPPGSPGTKGERGERGDMQSQAVVRSI
ARQVCEQLIQSHLSRYNSILNQIPSQSVSVRTVPGPPGEPGRQGPPGLQGEQGPPGRPGF
PGGNGLSGRPGERGFPGEKGEKGTPGVGTQGPRGLPGPPGPPGEGRTGSQGPPGRPGPQG
TPGRTGSPGISGPAGPPGYCDQNACLGYNIGVQQLPPSSYQNYGPTDTNDEEGEEEEDPY
GGYRHYPPQYYQPSYPNPRVAQPGTAYPGAMMRERGTHRFSRSMTERSGTQATTQEEDKS
AH
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtagtcaggttgagaatgaccgcgttgtggccgctaatcttcctggcactgatg
cagtttgcagatcctacaaaagggcaaattgcaggcccacgaagactgcgatttaaagtc
atgggtcctgacaagttgtatgtgttatggaaagagccaaagggagaatacaatggctat
agatttatttacaacagtgtgccggatggagagaggaatgagcttcgaattggaaagggt
caaaccaaggcaataataaatgacttcaatcccacaaaggagtacaaagtcaaggttata
gctgtgagtggaagtcaacaaagcagagcacttgaaggaagctttggagctcagggccgg
gaatttgagagagaaaacacccaaccaccgagaataaaggagatgcctacagaggatggt
attgaactatcaggagtggatcagtttgtgtgcaccacatctgcgatcgctgatattgtc
atcctggtagatggctcgtggagtatcggcaggctcaatttccgtctggtgcgcacattc
ctggaaaacctggttaatgctttcgatgtggaaattgataaaacccgtataggactggcc
cagtacagtggagatcccaggattgagtggcacctcaatacctttaccactaaagattct
gtcattgatgctgtcaaaaacctgccatacaaaggaggaaacacactcacaggtttggcc
cttacatacattctgaagaacagcttcaaaccagaatctggttctcgaagcaacgttcct
aaaatcgggatcctgatcaccgatggtaaatctcaggatgctgttgacagtcctgcccag
agcttgaaggatgccggtgttgagctctttgccattggggtaaagaacgcagatgaaaat
gagctgaaggtcattgcctctgagccacacgatacacacacctacaacgtggccgacttc
agcatcatgaatactatagtggagggtctgaccaggactgtgtgcgaaggtgtagagcaa
caagacaaagagatcagaagagattcagtccctgaagacacactaaactctcctcaggac
ttggtgacgtctgaagtgacagcgcgaagtttccgtgtatcctggacccatgcaccaggc
agtgttcagaagtaccgtgtgatttactatcccagcaaaggaggtcagccagaagaagtt
gtggtggaaggcacagagacctcagccgtgctgaaagacctcagctccctgactgagtat
gagattgctgtgtttgctgtgtacgcagcctcagccagtgaggctctcaggggcagtgaa
accacactggctctgcctgtggtcagtggtctggagctgtatgatgttactcaacacacc
atgcgtgctcgatggaggcctacagaaggggctactgggtacatgcttgtgtatgcaccc
ctaatcagtgaaactattgatgagactgaggtcaaagtagcagacaccgtgacagacttt
gggctggtgggtttaagtccggatacagaatacacagtgacagtctatgccatgttcgga
gatgaggccagcgatcctgctactatgcaggagaccaccttgcctctgaaggctcctcgt
aatcttcgtgtcactgaggtggaccacaactcggtgcggctcaactgggatgcaccgtca
agcacagtcaaaggctatcggctgaagtacgtcaaaagtaacggtgcacaaactaatgag
gttgatacgggtccagtttctaatgtatatctacggaacctggcctcccaaacagagtac
acagtgtctgtgtttgctgtgtatgatggggatcagtcagaacccctgaagggcgttttc
accacaaaactcgttccagctccacggtccattaagattgatgaggtgacaccaaatagt
ttccgggtgagctggacacaaccaggggacggagtggagctttataaactcgcctggaga
tccttaggaggaggagacactaaagaggtggttgtaccaggcaacataaatacctatgtg
gtgaatgatctttctcctcttactgagtatgaagtgctgttgtctgctgtctatagagat
gaggctgagagcagtgctgtacctgctttagagaccacattgcccatgcctgctaccaca
gccttcccctctacaaccccaccagtcatgcggctgggagtgacgaatgtgctggtggac
gatgagaccacgaacagtctgcaggtcagctgggacattgatgatgcagatgttgagcag
tacagagtgacctacgtcagccagagaggagaccgtgcagaagagtcggtgctggtccga
ggtagtagaaagagtgtgatattgcagcctctcctctcagacacagaatacaagatcaca
gttaaccctatttatccggagggagaagatagcgcattctctcagtcctccgttggccgt
acattaccactgactgcacccagcaacctgagggtgtctgaggaatggtacaaccgcttc
cgcctcacctgggacacacctgcctcacccaccatgggctacaggatcatctaccagcct
acttctgtgtcgggtcctgctctggagacgttcgtaggagaagatgtgaacacactgctg
atcctcaacctgctgactggcactgaatacagcgttaaggtcatttcttcatacacaaca
ggctccagtgagcctctcaccggcacagccaagacactgtttctgggagtcagcgggctc
agtacataccaggtgcagatgaacagcatgtgtgcacaatggcagcctgtcagccaggcc
tccctctacagggtcaccatcgagtccctgctcaatggtcacagacaggagcacagttta
agtggtggtgcctccaggcagtgtttcttcaacctgtcgcctaacacgcagtacaagatc
agcgtctacacacagctacagaacatggagggccctgccgtcaccatcatggacaccaca
tttccagctccaacccagccaccaactccacctcccaccactgcaccgattcccaccatc
ccatcagctaaagaagtttgtaaagcagccaaagcagagttggtgttcttggtggacggc
tcctggagcataggagatgacaattttcagaagatcatccgcttcctatacagcaccact
ggcgctttggatatcattggtcgtgaaggaacacaggtggccatcgttcagttcagtgat
gatgccaggacagagttcaagctcagctcctacagggacaaggagtctctgctggatgct
gtacagcgcatcacctataagggaggaaacaccaaaacaggtcgagccattaagcacgtg
aaggagagcatctttacagaagaggctggtgtgaggaggggaattcccaaagtcctggtg
gtgctcacagatggccggtcacaggacgacgttaacaagatctccaaagacctgcagaca
gagggttacatcatctttgccattggctttgctgatgcggattacggggagctggtgaac
attgcaagcaagcccagtgagaaacacgtcttctttgtagacgatctggatgcagtcagt
aaaatcgaggagcagctcataacatttgtgtgtgaggcagcaacagccacttgtccatct
ttgctgatgagtgggaatactttggcaggtttccgtatgatggagatgtttgggctggtg
gagaaggactacagtaatgtgcagggtgtttccatggagcctggaactttcaacagcttc
ccctgctacagactgcacaaggatgctctcatttcacagccgaccaaatatctgcaccct
gagggactcccttctgactataccgtgtcagtactgttccgcatcctaccagaaactcct
caggaggcctttgcattgtgggaaattctcaataaagccaatgaacccttggtgggtctc
atcctggacaatggtgggaaaacattgacattctttaactatgactacaagggtgatttc
cagacagtgacctttgaaggacctgacatcagaaaaatcttttatggcagttttcacaag
cttcatgtggcagtcagcaagacctctgcgaagatagtcattgactgtaagatagtggat
gagaagcccatcagcgctgctgggaacatcaccacagatggaatggaggttctgggccga
atggtgcgctcgcggggcagcagggacaactcagcatcgtttcagcttcaaatgtttgat
attgtctgtagtacatcatgggccagtcgagataaatgctgtgagctcccaggcctgaga
gtagagcaagactgtcctgctctgcctcatgcatgcacctgctctcaggacagtaaagga
ccaccaggaccctctggacctccaggtggtcctggtataagaggctcaagaggtgaccga
ggggaaccaggctcagtgggacctcaagggccaaccggtgaaattggacctccaggacct
caggggcctcctggaccacaggggccaagtgggctctctatccagggatcaccaggatct
gcaggagaaaaaggagaaaaaggtgaccaaggtctgccaggtcctcagggtgtgccagga
gccagtggaggtcctggcagagacggcctaccgggacagaggggtttgcctgggaaagat
ggatcacagggacagcagggcccaccaggacctattggaagtccaggtgctcccggagca
ccaggaaccactggacctccaggaccacatggtgatcatgggccacctggctctcctggt
accaaaggcgagcgaggggagaggggtgacatgcagtctcaggcagttgtccgctctata
gcccgacaagtgtgtgaacaactaattcagagccacttgtctcgctacaactcaatcctg
aatcagatccccagtcagtctgtgtcagtccggacagtgccaggtcctccaggggaacca
ggccgtcagggccctccggggctacagggagagcagggacctccaggtagaccaggcttc
cccggaggtaatggactgagtggccgtccaggagagagagggttcccaggagagaaagga
gagaaaggcactccaggtgtggggacacagggaccccgtggcctcccaggacccccaggt
cctccaggtgagggccggacaggaagccagggtcctccaggcaggcctggacctcagggc
actccgggtcgcactggaagtcctggcatctctggtcctgctggaccaccaggctactgt
gaccagaatgcctgcttagggtacaacataggagtacaacagttacctcccagttcctac
caaaactacgggcccactgacactaatgatgaagagggagaggaggaagaggacccgtac
ggcggataccgccactacccaccccagtactaccagcccagctatcccaaccctcgtgtt
gcccagcctggcactgcttatcccggtgccatgatgagggagcgaggcacgcaccgcttc
tcccgcagcatgactgagaggagtggcactcaggccacaacacaggaagaggataaatct
gcacactga
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integrated database retrieval system
