Pangasianodon hypophthalmus (striped catfish): 113542317
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Entry
113542317 CDS
T05759
Symbol
dennd4b
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113542317 (dennd4b)
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113542317 (dennd4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
113542317
NCBI-ProteinID:
XP_026795546
LinkDB
All DBs
Position
Unknown
AA seq
1488 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAGDSAPPDEECQQRGGRGMEPISDLAVIARGLGEEVPEGFTC
IEKTLGGHPAELSAGLINNPHMFLCYRRSHDKPPIVELGVLYDGKEAVKQGWHVIETTPY
SRCASLSSGGPGTHKTFLMYRRAPDSQALNTLGVTDISFLMPSKGEAAPHTFCKVDKNLN
TGMWGPALYLCYKRAVAKANALVYEAGLISRYPEEDLESFALPDSVPVFCLPMGVTVESW
PLNTKYQLPVFSTFVLTTASGDKVYGAAIQFYEAYPREALTERQRVRLGLVSVVDRRPIT
NRMVQVKKSVCVLSHWPFFTVFQKFLTFIYRYSISGPHVLPIEKHISSFMHNVPFPSPQR
PRILVQLSPYDNLLLCQPVSSPLPLSGASFVKLLQNLGPENACTLLLAVLTEHKLLLHSL
RPDVLTSVSEALVSMTFPLRWPCPYIPLCPLRCADVLCAPMPFIVGVHSSYFDLYDPPSD
VVCVDLDTNTIFQSEDKKPLSWKSLPRKHGKILLSSLTHLHKTLEKICTPGHEEATLEFL
LTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRSYLLPITQAPSDRTTDCSSLFNLQGF
LKSRDRTQQKFYSHLTKTQMFTQFIEECSFVSDRHACLEFFDECVQKVDVEKPEEVRLID
LDETHSGEHTVFIMPPEEPQESDGSECPALYSYETFPILNPELFDRPQDQLRTTAKGSAP
NSPAPRRTKQEIKLAQKCAQKYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESTKVRALH
TAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYGYY
NKAVLESKWPSTNQGGRLRWAKLRNVLLAVAQFRQPIKHRQKSDSVSSKQGSSNCNLLPH
STLTRQTSWSGLSESSSHESLTGPITKSNSLSSMRPDKSKLARKAMLQNKSTDDPASRKP
PIGPRDMVTPSPVPPDDHVRVRRSDVCLSTFYKECAEPDTDCRCQPTERDGRPAEQRETL
NRKAVDENYNNVLSPSRGLAGKLQQLLTPTRHRNSSRRAASVDERRPATNGPSRKSSEQR
QSRKSHVAETLLKAKERLYNATSESSLSVGSDIDLTDPPNSGFSLRKSWDSTQEGAGLEV
SMSSCTLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSATFVPLLNAEICDLGPVSSSQ
YRSNWNMEDEVESAVRPPSGHDGIQQHLYNGVTEHDSSSETSTYSENSSNTLSSSLGGTP
QVTVAYLSPLVLRKELESLLENEGESVLSQVQLLDSHSILFWNLVWYFTRLGLPSNLLQL
VRASPLASQISQSPESTSVRVRLLWDTLTPDTDYWPPLYVLWRIHSGVPMRNFAWRRHNH
PFTLSFLEEILRCVGMNEVHKAITFFLETIAKQPGTPRIQRSLYREFLFLTLAAMGKDHV
AAFDKRYKAAYAKLSSSVGREELRRKRAQPPSPKAVDCRRCFLVPLDC
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggagaaatgtcctcagttggtggattattttgtggtggcggggctggcgggc
gactcggctccgccagacgaggaatgtcagcagagaggaggccgtggcatggagcccatc
agcgacctggctgtgatcgcccgtggccttggagaagaggtgcctgagggcttcacatgc
atcgagaagacgctggggggccacccagctgagctcagcgccggccttatcaacaaccca
cacatgttcctctgctaccggcgcagccatgacaaaccacccattgtggagctcggtgtg
ctgtatgatgggaaagaggcagtgaagcagggttggcatgtgattgagacaacgccgtac
agccgctgtgccagtctgagctcaggcggccctggcacccataagacgttcctcatgtac
cggcgcgcccccgactcacaggccctgaacaccctgggggtgactgatatctcatttctc
atgcccagcaagggagaagcagcaccacacaccttctgcaaagtggacaagaacctgaac
actggcatgtggggcccggcgctgtacctgtgctataagcgggctgtagcgaaagccaac
gccctggtgtatgaggcaggtctgatcagccgctaccctgaggaagatcttgagtcattt
gcgttgccagactctgtccctgtcttttgtctgcccatgggtgtcactgtagagagctgg
ccactcaataccaagtaccagctccctgtcttctccacctttgtcctcaccaccgcatct
ggagataaggtgtatggagctgctatccagttttacgaggcatacccacgggaggctttg
actgaaaggcagcgggtgcggctcgggttggtcagtgttgtggaccgccgacccatcacc
aaccgcatggtgcaggtgaagaagagcgtgtgtgtgctctcccactggccgttcttcacc
gtcttccagaagtttctcaccttcatctatcgttactccatctctggacctcatgtgctg
cccattgagaagcatatctccagtttcatgcacaacgtgcccttcccttcaccacagcga
ccacgcattctggtacagctgtctccatatgacaacctcctactgtgccagccagtgtcc
tcgcccttacccctgagtggcgccagctttgtgaaacttctgcagaatctggggccggag
aacgcatgtaccctgctgttggctgttctcactgagcacaagctgctgctacattccctc
cggccagatgtgctgacctccgtcagtgaagccctggtgtcgatgacgtttccgttgcgt
tggccctgtccgtacatcccactgtgcccgctacggtgtgcagatgtgctgtgtgcccca
atgcccttcatcgtgggtgttcactccagctattttgacctgtacgaccctccttcagat
gtggtgtgtgtggaccttgacaccaacaccatattccaatcagaagacaagaaacccttg
tcgtggaaatctttacccaggaaacacggaaaaatcctgctcagctcactcacccacctg
cacaaaactctggagaaaatctgtacccctggtcacgaagaggcgaccctggaattcttg
ctgacagattatgatctgatctacgggcgtcaaaagcagctggagttggagattcaggag
gccttcctgcgctttatgagctgcctcttaagaggctatcgttcttacctcctgcccatc
acccaggctccctctgacagaaccactgactgcagctccctcttcaatttgcagggtttt
ttaaaatctcgagatcggacacagcagaagttttattcccacctcaccaagactcagatg
ttcacgcagtttatagaggagtgctcctttgtcagcgacagacacgcatgccttgaattc
tttgacgagtgtgttcagaaggtggatgtggagaagccggaagaggtgaggctgatagat
cttgatgagactcacagtggagagcacacagtgtttataatgccaccagaggagcctcaa
gaatctgacggctctgaatgccctgcactctacagctatgagacgtttcctattcttaat
cctgagttgtttgaccggcctcaggatcagctccgtaccacagcgaagggaagtgccccc
aacagtcccgctcctcgccgtaccaaacaggagatcaagctggcacagaaatgtgcacag
aagtactctgcagtaccagacatgtggtccaagtgtctgctgggccactgttatggtctg
tggttcatctacctgcccacatttgtccgggctgagagtaccaaggtgcgggcactgcac
actgcctatgaggtgctcaagcacatggagacacggaaggtggtgctgcctgatgaggtg
tgctacaggattctaatgcagctgtgtgggcagtatgggcagccagtgcttgctgtcagg
gtcttgctggagatgaagaaagcaggaatcactcctaacaccatcacgtacgggtactac
aataaggctgtactggagagcaagtggccatccaccaatcagggaggtcgccttcgatgg
gccaagcttcgcaacgttcttttggctgtggcacagttcagacaaccaatcaaacacagg
caaaagagtgactctgttagctcaaaacaaggtagctccaactgtaatcttctcccgcac
tccactctcacacgccagaccagctggagtggtttgagtgaaagttcaagccatgaatca
ttgactggtcccatcactaagagcaacagtctaagcagtatgcgacctgacaaatctaag
ttagctaggaaagcaatgctacaaaacaaaagcactgatgaccctgcctcccgcaaacct
cccattggtcctcgggatatggttacaccctccccagttccgcctgatgaccatgttaga
gtgcgacggagtgatgtctgcttgtccaccttttacaaggagtgtgcagagccagataca
gactgcaggtgccagccgactgagagagatggcagacctgcagagcagcgggaaacgctt
aatcgcaaggctgtagatgagaactacaataacgtgttgtccccgagtcgtggactggca
ggtaaactgcagcagcttctcacaccaacgcgtcaccggaactcatcacgccgagcagcc
agtgtggacgaacggcggcctgctactaacggcccgtcacgcaaatcatctgaacagaga
cagtctcgcaaatcacatgtggccgagacactgctgaaagccaaagagcgactctacaat
gccacctcagagagctcattgtctgtgggcagtgacattgacctgacagaccctccaaat
tctgggttttcactcaggaagtcatgggattctacacaggaaggggcagggcttgaggtg
tcgatgtcaagctgtactctttgccggagctgtaactcattggtgtatgatgaggagatc
atggcaggctggacatccgatgactccaatcttaactctagctgcccgttttgctcagca
accttcgtaccactgcttaatgcagagatctgtgaccttgggcctgtcagcagcagtcag
tatcgcagtaactggaacatggaggatgaagtggagagtgcagtgaggccccctagtggt
catgatggcattcagcaacatctgtataatggtgtgactgagcatgactccagttcagag
accagcacatactctgaaaacagcagtaacactctaagctcatctttgggtggcacccct
caggtgacagtggcgtacctgagccctctagtcttgcggaaggaactggaaagtcttttg
gagaacgagggagagagtgttctctctcaggtccagttactggacagccactccatcctc
ttctggaatctagtgtggtacttcactcgccttggcctccccagcaatctgctgcaactg
gtgcgggcctctccgctagcttcacagatttcacagagccccgagagtacttcagtaagg
gtgaggttactgtgggacacgttgacgcctgatacggattactggcctcctctctatgtg
ctctggagaatacacagtggcgtgccgatgcgtaactttgcgtggcgcagacacaaccac
cccttcacgctgagctttttggaggaaatcctgcgctgtgtcggtatgaatgaggtacac
aaggccatcacgttcttcctggaaaccatcgccaagcaaccaggcactccccggatacag
aggagtttgtacagggaatttctgttccttactttggctgctatgggcaaagaccatgtt
gctgcttttgacaagaggtacaaggcggcctatgccaagctgagtagttccgtgggccga
gaggagctgaggaggaagagagctcagccacccagccccaaagctgtggattgcaggcgc
tgtttcctagtgcccctggactgctga
DBGET
integrated database retrieval system
