Pangasianodon hypophthalmus (striped catfish): 113542319
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Entry
113542319 CDS
T05759
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113542319 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113542319 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113542319 (usp5)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113542319 (usp5)
Peptidases and inhibitors [BR:
phyp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113542319 (usp5)
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113542319 (usp5)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113542319 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
113542319
NCBI-ProteinID:
XP_026795550
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MAEVSEVLMSVLSTIRVPRPGDRVHKDECALSFASPESEGGLYVCMNSFLGFGSRFVERH
HARTGQRAYLHIKRTRKPHTQKEDDGSTGSGDPPKKKPTRLAIGIEGGFDVDQDQYEEEV
KVVLFPDRQEVTSEDLATMPDVVRERVSLSMAGLLAADSVSQALQVQQWDGEVRQESKHA
AELKQLDNGVKIPPSGWKCEVCDLQENLWMNLTDGKVLCGRRYFDGSGGNNHALQHFQET
GYPLAVKLGTITPDGADVYSYDEDDMVLDSKLAEHLSHFGIDMMTMEKTERTMTELEIAV
NQRVGEWEVIQESGTTLRPLWGPGLTGMKNLGNSCYLNSVMQVLFTIPDFQEKYVSSIDK
ILDEAPSDPSQDFKTQVAKLGHGLLSGEYSKPAPDPGDDPSASSEPRGDQVGIAPRMFKA
LIGRGHPEFSTNRQQDAQEFFLHFINMVERNCRSGPNPSEAFRFLVEERIVCQQSQKAKY
TQRVDYIVQLPVPMDQATNIEELQEAERLREEAEASGSPPPAAPRAQIPFSACMNALSEP
ETLTDFWSSAVQGKTTATKTTRFASFPDYLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDL
SELRGAGQQPGEELLPEVAPPPLMTPDVEVKGILGSHGNEEDDSLYSPLLSPVLDESTVS
QLCEMGFPLEACRKAVYYTGNTGIDAAMNWVMGHMDDADFAAPLVLPGSSSAPGSTPTES
LSEEHLATIVSMGFSRDQASRALKATSNVLERAVDWIFSHLDDLESMEVSEGGRSEGASE
ASRDAPPGPRVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKP
PKDLGYLYFYRRVAE
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggttagcgaggttctgatgtcggtgttgtccactatccgggtgccgaggccc
ggagaccgcgttcataaagacgagtgcgcgctgtcattcgcctctccggagagcgaggga
ggtctgtacgtctgtatgaactctttcctgggcttcgggagtcgctttgtggagcggcat
cacgcccggaccggccagagagcgtacctgcacatcaagcgcactcgcaagcctcacacc
cagaaagaggatgatggcagtactggatcaggagatcctcccaagaagaaacccactcgt
ctggccatagggatcgagggcggatttgacgtggatcaggatcagtatgaggaggaagtc
aaggttgttcttttcccagacagacaggaagtgacatcagaggacctggccactatgcca
gatgtagtgagagagcgagtgtcactgtcgatggcggggttgttggctgcagactcggta
tcacaagctttgcaggtgcagcagtgggatggagaagtgaggcaggagtccaaacatgca
gctgagctcaagcagctcgacaacggagtcaaaattcctcctagtgggtggaagtgtgaa
gtgtgtgacctgcaggagaacctgtggatgaacttgacggatggcaaggtgctgtgtggg
cggagatatttcgacggttcaggtggaaataaccacgctcttcagcacttccaggagaca
ggctacccactggctgtcaaactgggcaccatcacccctgacggagctgatgtttactca
tacgatgaggatgacatggttttggactcaaagctggcggaacatctctctcactttggt
attgatatgatgaccatggagaagacagaacgcactatgactgaattagagattgcagtg
aaccagcgtgtgggtgagtgggaggtgatccaggagtctggcaccacgctgaggcctctc
tggggccctgggctcacgggcatgaagaacctgggcaacagctgctacctcaactcagtc
atgcaagtgctcttcaccatccccgatttccaggaaaagtatgtgtccagtattgacaag
attctggatgaagccccgagtgatcccagccaagactttaaaacgcaagtagcaaaactg
ggccatggtttgctctcgggagaatactctaagcctgctccagacccaggcgatgacccc
agtgcgtcctctgaacccaggggagaccaggttggcatagcaccacgcatgttcaaagcc
ctcattggacggggccaccctgaattttccactaatcggcaacaagacgctcaggagttt
tttcttcacttcataaacatggtggagaggaactgccggtctgggccaaacccatctgaa
gcattccgcttcctggtggaggaaaggatcgtgtgccagcagtctcagaaggccaaatac
acccagcgagtggactacatagttcagctgcctgtgcctatggaccaggccaccaacata
gaagagttgcaggaggccgagcgtctgcgggaagaggcggaggcatctggaagcccccct
cctgccgctcctcgagctcagatcccattctccgcctgcatgaatgctctcagtgagcca
gagacactcacagacttctggagctctgcggtgcagggcaagaccactgccaccaagaca
acacgctttgcttcatttcctgactaccttgtcatccaaatcaagaaatttactttcggc
ctggactgggtccctaaaaaactggatgttagcattgatgttcctgatacactggatctt
agcgagctccggggggccggacagcagcctggggaggagcttcttccagaggtggctccg
ccccctctcatgacccctgacgtggaggtcaaaggtatcctgggttcccatggcaacgag
gaggacgactctctctattccccactgctgtctccagtgttggatgagtccacggtgtct
cagctgtgtgagatgggctttcctctcgaggcctgcaggaaggctgtgtattacacgggg
aacactggcattgatgctgccatgaactgggtgatggggcatatggatgatgcggatttt
gctgctcccttggtgttgcctggctctagttctgctcctggatccacacccactgaaagc
ctgtcggaagagcacctagcgaccatcgtctccatgggatttagccgagatcaagcctca
cgtgctctcaaagctacaagtaatgttctcgagcgggccgtggactggatcttctcccac
ctggatgatctggagtctatggaggtgtctgagggcggccgctcagagggagccagtgaa
gccagccgagacgcgccacccggaccacgtgttcgtgacggaccgggaaagtacgagctg
tttgcttttatcagtcacatgggcacgagcacaatgtgtggtcactacgtctgccacatc
aaaaaggaccaacaatgggtaatctttaatgatcaaaaagtgtgcgcctctgagaaacca
ccgaaggacctgggctacctgtacttttacaggagagtggcggaatag
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