KEGG   Pangasianodon hypophthalmus (striped catfish): 113542357
Entry
113542357         CDS       T05759                                 
Symbol
atg12
Name
(RefSeq) ubiquitin-like protein ATG12
  KO
K08336  ubiquitin-like protein ATG12
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04068  FoxO signaling pathway
phyp04136  Autophagy - other
phyp04140  Autophagy - animal
phyp04621  NOD-like receptor signaling pathway
phyp04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    113542357 (atg12)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113542357 (atg12)
   04136 Autophagy - other
    113542357 (atg12)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    113542357 (atg12)
   04622 RIG-I-like receptor signaling pathway
    113542357 (atg12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113542357 (atg12)
   04121 Ubiquitin system [BR:phyp04121]
    113542357 (atg12)
   03029 Mitochondrial biogenesis [BR:phyp03029]
    113542357 (atg12)
Membrane trafficking [BR:phyp04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    113542357 (atg12)
Ubiquitin system [BR:phyp04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitin-like proteins (UBLs)
   113542357 (atg12)
Mitochondrial biogenesis [BR:phyp03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    113542357 (atg12)
SSDB
Motif
Pfam: APG12 ATG8
Other DBs
NCBI-GeneID: 113542357
NCBI-ProteinID: XP_026795630
LinkDB
Position
Unknown
AA seq 125 aa
MSDSAESPTEPQKEESSTQNQQNVAADSGDTAKTEEKKKIDVLLKAVGDTPIMKTKKWAV
ERGRTVQSLAQFISRFLKLEPSEQLFIYVNQSFAPSPDQEVGVLFDCFGSDGKLVLHYCK
SQAWG
NT seq 378 nt   +upstreamnt  +downstreamnt
atgtctgacagcgcagaatctcccacagagccacagaaagaagaatcatcaacacagaat
caacagaatgtcgcagcagactccggagatactgcaaagacggaggagaagaagaagatc
gatgtgctgctgaaggcagtaggagacactcctataatgaagactaagaagtgggcagta
gagagagggaggactgttcagtctcttgctcagttcatctcacgctttcttaaacttgag
cccagcgaacaactgtttatttatgttaatcagtcattcgcgccatcaccagatcaagaa
gtgggtgtcctttttgactgttttggcagtgatgggaaacttgttcttcattattgcaag
tcacaagcctggggatga

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