Pangasianodon hypophthalmus (striped catfish): 113542386
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Entry
113542386 CDS
T05759
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
phyp04054
]
113542386
Pattern recognition receptors [BR:
phyp04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
113542386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
LRR_14
TIR_2
LRR_1
LRR_9
DHU1_N
FGF-BP1
Motif
Other DBs
NCBI-GeneID:
113542386
NCBI-ProteinID:
XP_026795686
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MASYRNQALISVTIIASMFQFSMSYSFRNCIESPGSNHTTFKCTKRQALTVTAIVGDIPL
SATNISISYCKLVKIPPQSFSHLPKLSVLQLNNNHIRNIDKDAFANLQYLHTLNLSSNDI
VYLNSSIFHDLRNLSTLILADNRLTNISSDLFSSLSKLEILDLRRNRVMDFSAVVHSISN
LKGLKTLDISFNRLSTLLHSASLPQSLSHLYLGNNMLTTLKCRNDFLSSVKVLDLSYNRG
LSAQAFFGLNLSSLTYLCLHSTSISIITLLNRTNVMPWHVDFSGLGLTEPQMLVSLCKQL
SYYSNENIEKMLLQSNDLKVLNNKTLSDCPPITHVLDLSSNQLKSISCLQFLEGQNHLVK
LRVEHNHLTHLISCKNHTRFLHLKELSYRYNRILEVNSFAFSHTPNLTTLQLNINIIAYL
DRKALNGLKDLVTLRLDNNLLTDLYNDSFKDLHSLRTLNLRNNQISVIFNNTFYSLSKLS
ILDLGGNKITHLMPLAFEGLDSLNNLYLDRNHLAEIDGHLIGSLHRTLQVLDLHGNFIHY
FTEHVYSPFVTLTKLTDLKLDGQMPYGITLLPHAFFRGLTSLKSLYLSNNHISSLSTDTF
DDLRNLKFLTLDDSCVGVTQLKPGVFKNLHKLEILMVENMGIESFSKEVFGNLTGLKVLH
LNRNAMQTLDVDLLENLTNLQYLDVRNTPLSCNCPNSELQNWTKNNQRVQFIYLYNLTCP
DVKGSNFYNFDTHVCSDFGVYWFASTYIVTLLVTLLPLLYIKLYWKFKYGYYVFCSWFGE
QWRRLREEEEKCTYDAFISYNSADEEWVMEQLLPNLEGSGFRLCLHHRDFEPGRNIVDNI
VAAVYNSRKTVCVVSHNFLRSEWCSLEIQLASYRLFDEMQDVLLLVFLEYIHERQLSAYH
RMRKVMLKKTYLQWPGPDCTDPVKSQELFWKQLKRALRSSNSRCQDEEQMEENVQNGQRK
GEARAEEREYFMNQAQMDDEPYYLMP
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatatagaaaccaagcactgatctcagtgacgataatcgcttcgatgtttcag
ttcagcatgagctacagtttcaggaattgcatagaaagtcccggctcaaaccatacaacc
ttcaaatgcactaaacgccaagctctgacagttactgccatcgtgggcgatataccactt
tctgcaacaaacatttcgatctcttactgcaaacttgtgaaaattcctccacaaagcttc
agtcacctgccaaagctcagtgttctgcaactaaacaacaatcacataaggaatattgac
aaagatgcctttgctaatctacaatatcttcacacactgaacctgtccagcaatgacata
gtttatctcaattcttccattttccatgacctccggaacctcagcactttgatcctggct
gacaacagactgacaaatatatcttctgacttattttctagtttgtctaaattagagatt
ctggacctacgtaggaacagggtaatggatttctcagcagtggtgcactccatatcaaac
ctgaaagggctgaagaccctggacatttcctttaacagacttagcactttgctacactca
gccagcctgccacagtcactttcccatctttatcttggtaataacatgctgaccacactg
aaatgcaggaatgattttctcagtagcgtcaaagtgctggatctctcttataatagaggt
ctttcagcccaggctttctttggtctgaacctgagcagtttgacatacctgtgcctgcat
tccaccagcatttcaataataacgctccttaatcgtactaatgtgatgccttggcacgta
gacttctcaggtttgggattaacagagccccaaatgctagtttcattgtgtaaacaactg
tcatactattcaaatgaaaatattgaaaaaatgctccttcagagcaatgatctaaaagtt
ctgaataataagacattatctgactgcccccctatcactcatgttttggacctttcatcc
aatcagctgaagagcataagctgtttgcaattccttgaaggacaaaatcatcttgtgaaa
ctcagagttgaacataaccaccttacccatctaataagttgcaaaaatcacacaagattt
ctccacttgaaagaactaagctaccgctacaatcgcattcttgaagtgaattcctttgcc
ttcagtcatacaccaaatctgacaactcttcaactgaatataaacataattgcctacttg
gatcgcaaagcactgaatggacttaaagaccttgttacactccgcctggacaacaatctt
ctgactgatctctataatgatagctttaaggaccttcacagtcttcggacacttaactta
cgcaataaccaaatttctgtcatattcaacaacaccttctactccctcagtaagctgagc
attttagatttgggtgggaacaagataacacatttaatgcccctagcatttgaagggctg
gacagcttgaataatctttacttagaccgcaatcatctagctgaaattgacggtcacctg
attggaagcctgcatcgcacactgcaagtgctagatttacatggcaatttcatccattac
tttacagaacacgtatactccccatttgtaacgctaacaaagctgactgacttaaagtta
gatggacagatgccatatggcataaccttattacctcatgcattctttcgtggtctcact
tccctgaaaagtctttacctcagcaacaatcatatctcttctctcagcactgacacattt
gatgacctaagaaacctaaagttcttaacattagatgattcatgtgttggagtgacccaa
ctcaagccaggagttttcaaaaaccttcacaagctggagatattaatggttgagaacatg
ggcattgagtcattctcaaaagaggtgtttggtaatctcacaggactgaaagtattacat
cttaaccgcaatgccatgcagactttggatgtggacttgctggaaaatctgactaatcta
cagtatctagatgttagaaatacacctctcagttgcaactgtcccaatagtgagctccaa
aattggacaaaaaacaaccaaagagtacagtttatatatctttacaacctgacctgtccg
gatgtcaaagggtcaaacttttacaactttgacacccatgtatgttcagattttggagtg
tactggtttgcctccacttatattgtaacattgctagtaacattacttccactactttat
atcaagctctactggaaatttaaatatggctactacgtcttctgctcttggtttggtgag
cagtggcgtcgccttcgggaagaggaagagaaatgcacgtatgacgctttcatctcctac
aactcggcagatgaggaatgggtgatggagcagcttctcccaaaccttgaagggagtggg
ttccgactttgcctccaccaccgggactttgagccaggccgcaacatagtcgacaacatt
gtggcagcagtctacaatagccgcaagacggtgtgtgtggtcagccacaacttcctccgc
agtgagtggtgctccctggagatacaactggccagctaccgtctttttgatgagatgcag
gatgtgctcttacttgtctttttggagtacatccatgagcgacagctctctgcctatcac
cgtatgagaaaggttatgttgaaaaagacttatctacagtggccaggaccggactgcaca
gatcccgtcaagtcacaggagctgttctggaagcagcttaagagagctttaaggagcagc
aacagtagatgccaagacgaagaacagatggaggagaatgttcagaatgggcagcggaaa
ggtgaagcaagggcagaggaaagagaatatttcatgaaccaggcacaaatggatgatgag
ccatattatctaatgccctaa
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