Pangasianodon hypophthalmus (striped catfish): 113542446
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Entry
113542446 CDS
T05759
Symbol
rbm12b
Name
(RefSeq) RNA-binding protein 12B
KO
K24526
RNA-binding protein 12
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113542446 (rbm12b)
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113542446 (rbm12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
113542446
NCBI-ProteinID:
XP_026795799
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MAVVIRLQGLRITAGSEDIRNFFTGLRIPDGGVHIIGGELEEAFIIFASDEDARRAMTRS
GGCIKGSPVNLLLSSRSEMQKVLEESTRKSEADNRRNYKEVVKRPAVEGRPMSLNEDMKV
DMRRGDNQTMGNRPPLASPNDSRTQKKEGDGDSLYLYLSGMPFSATKEDVRVFFDGIQID
DLIFMRNNYGMFNGCGLVKFRTREDAIEGLKRDRKYIGPRYIRVMPASEHQWVKSGGSVV
PEVASQRKHTLERTRSRSPVRHRSHSPSSEEFGVLYENLPYSVEKRDIKAFLHPVSLTDD
QISIFVDNNSNRSKSAIVVFKNLKDYCSGLAHHKETFLHSVVYVSPVSKEKIATILESTD
NPREDHRRSSRSSERSQKSVYDSEKRCIYVRNLPFDVRKVEIMDFFHGFQLAEDRIILLH
DDRGAGLGEALVIFQTEKEAMMAQSLNGQRFLGSEVMLKCITWAQMQEFGIDNSSMPERN
FQMNLPRYGGDANLLNDRMYQDSCDLMPDAPHYGPGNSGPVDHFENPDAYGQGPCGSDPH
QYGPPDQQFNRPTCVRLLNLPSKIRVDEIYDFCYGYRVIPGSVSLQYNRSGAPTGTATVV
FESHSEAVTAVQELNGRPIGTRKINIVFE
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtcatccggttacagggacttagaatcacagctggttctgaggacattcgc
aatttcttcactggccttagaatacccgatggtggggtacatataattggcggagaactt
gaggaagcattcataatttttgcatccgatgaagatgcaagacgagcgatgactcgctca
ggaggatgcattaaaggctctccagtcaacttacttttgagtagcaggtcagagatgcag
aaggttcttgaggaaagcacaaggaaatcagaagccgataacaggaggaattacaaggag
gttgtcaaaagaccagcagtcgaagggagacccatgtcactgaatgaggacatgaaagta
gatatgcgaagaggagataatcaaaccatgggaaacagacctcccctagcttctcctaat
gactctcgaactcagaagaaagaaggagatggagatagcctgtatttgtacttgtctgga
atgccattctcagcaacgaaggaggatgttcgtgtcttttttgacggtatacaaattgat
gacctaattttcatgcgaaacaattatggaatgtttaatggatgtggtttggtcaaattt
agaaccagagaggatgcgattgaaggtctgaagagggatcgaaaatatattgggccacgt
tacatcagagttatgccagcctcagagcatcagtgggtcaaatcagggggctcggttgta
ccagaagttgcaagtcagagaaaacacactttagagcgtacaagatctcgctctcccgtt
cgccatcggtcacattctccttccagtgaagagtttggtgtgttgtatgaaaacctccca
tattcagtcgaaaagcgagatataaaagccttcctccatcctgtgtctttgacagatgac
cagatcagtatttttgttgataacaatagcaataggagcaaatcagctattgtggtgttc
aagaatctaaaggactattgttctggcctggctcaccacaaggaaacgtttctccacagc
gttgtttatgtgtctcctgtctccaaagagaagattgccactatactagaatctactgat
aacccaagagaagaccatagaagatccagcagatcatctgaacgttcacaaaagagtgtt
tatgactctgagaaacggtgcatatatgttcgcaacctgccttttgatgtccgtaaagta
gagatcatggacttcttccatggattccagcttgcagaggacaggattatcctgctccat
gatgacagaggagctgggcttggtgaggctttagtgatttttcagacagaaaaggaggca
atgatggcacagtctctgaatgggcaaagatttcttggatcggaggtcatgctgaaatgc
atcacctgggctcagatgcaagaatttggtattgacaacagcagtatgcccgagaggaac
tttcagatgaacttgccaaggtacggcggtgatgcaaatttgcttaatgaccgaatgtat
caggacagttgtgacctgatgccagatgctcctcactatggtcctggaaacagtggtcca
gtggatcattttgaaaaccctgatgcttatggacaggggccgtgtggttctgaccctcat
cagtatggaccacctgaccaacaatttaatcggccaacatgcgtcaggttgctcaatcta
ccctctaagataagggttgatgaaatctatgacttctgctatgggtacagagtaattccg
gggtcggtctcgttgcagtataataggagcggagcacctacaggcactgcaactgttgtg
tttgaaagccacagtgaggcagtcactgctgtccaagaattaaatggaagacccattggt
acgaggaaaattaatattgtgtttgagtag
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