Pangasianodon hypophthalmus (striped catfish): 113542509
Help
Entry
113542509 CDS
T05759
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113542509 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113542509 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113542509 (usp30)
04121 Ubiquitin system [BR:
phyp04121
]
113542509 (usp30)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113542509 (usp30)
Peptidases and inhibitors [BR:
phyp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113542509 (usp30)
Membrane trafficking [BR:
phyp04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
113542509 (usp30)
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113542509 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
113542509
NCBI-ProteinID:
XP_026795896
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MSWCGQEATDELLREFLRTRSSARNRMMKNWGVIGGIAAAMAVGVYVLWGPSADRKKRRR
GMVPGLLNLGNTCFLNALLQGLATCPSLIRWLQDFTTHSSSRLSDTGTQRDTQTDTQTDT
QAGMQTDTQTSTQTDTRVSKTLLQLLTALSSPDPGEDDVLDAGCLLEALRLYRWHISSFE
EQDAHELFHVLTSSLEEERERQPRVTHLFDMETLEKSPETSENSMSCWSRGPLHPIPNLW
RTQHPFHGRLTSYMACKRCERQSPVRYDSFDSLSLSIPAVQWGRPVTLDQCLQHFISSET
IKEVECENCTKKQAETEDGQVLESQRTTFVKQLKLGKLPQCLCIHLQRLTWSPEGAPIKR
HEHVQFSEYLSMDRYKHSSATQRLQKPSRAKKPTPEEPHNQNVANGVDPEHHNNNNKPLS
NGSISSVFLRPAALGPQLDLTHDFSSSEYLFRLTAVLVHHGDTHSGHFVTYRRGPASFSP
QWLWVSDESVRKASLQEVLSSSAYLLFYERVRK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtgcggacaggaggccacagacgagctgctccgcgagtttttacgcacacgg
tcgtctgccaggaataggatgatgaagaactggggcgtgatcggaggcatcgccgctgct
atggcggtgggtgtgtacgtgctgtggggtcccagcgcagacaggaagaagaggaggaga
ggcatggtcccggggttgttgaacctaggaaacacgtgcttcttgaacgcactgctgcag
ggtctggccacgtgtccttctctcatcaggtggctccaggacttcaccacccacagcagc
tcccgtctctccgacacgggcactcagagggacacgcagacagacacgcagacggacacg
caggcgggcatgcagacagacacgcagacgagcacacagacggacacacgagtttccaaa
acactgttgcagctccttacagctctgtccagtcctgatccaggagaggatgatgttttg
gatgcaggatgtctgttagaagctcttcgtctctacagatggcacatcagctcctttgag
gaacaggacgctcacgagcttttccacgtcctcacgtcgtctctggaggaggaacgcgag
cggcagcccagagtcactcacctgtttgacatggagacgctggagaaatcacccgagacg
agtgaaaactccatgagctgttggagtcgagggcctctgcaccccatccccaacctgtgg
aggacgcagcacccgttccacggacgcctgaccagctacatggcctgcaaacgctgcgag
cgccagagtccggtgcgttacgattcattcgacagcctttcgctgtccattcctgccgtt
cagtggggtcggccagtcactctggatcagtgtcttcagcatttcatctcctcagaaacc
attaaagaggtggagtgtgagaactgcaccaagaaacaggctgagactgaggacggtcag
gtcctggagagccagaggacgacattcgtaaagcagcttaaactcggaaagctcccccag
tgtttgtgtattcacctgcagaggctcacctggtcccccgagggcgctcccattaagaga
cacgagcacgttcagttctccgagtacctcagcatggaccgctataaacacagcagcgct
acacagagactccagaagcccagcagggccaaaaaacccacaccggaagaaccacacaat
caaaatgtcgccaatggagtcgacccagagcaccataacaacaacaacaagccgctgtca
aacggcagcatctcgtcggtctttctccgtccggcggcgctcggccctcagctcgacctc
acacacgacttcagctcatcggagtacctgttccggctgacggcggtgctcgtgcaccac
ggcgacacgcactcgggtcacttcgtcacgtaccggcgtggcccggcgtcgttcagcccg
cagtggctgtgggtttcagacgagtccgtccgcaaggccagcctacaggaagtcctctcc
tccagcgcgtacctgctgttctacgagcgagtgcgcaagtga
DBGET
integrated database retrieval system
