Pangasianodon hypophthalmus (striped catfish): 113542555
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Entry
113542555 CDS
T05759
Symbol
thbs3
Name
(RefSeq) thrombospondin-3
KO
K04659
thrombospondin 2/3/4/5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04145
Phagosome
phyp04510
Focal adhesion
phyp04512
ECM-receptor interaction
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113542555 (thbs3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113542555 (thbs3)
09144 Cellular community - eukaryotes
04510 Focal adhesion
113542555 (thbs3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113542555 (thbs3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113542555 (thbs3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113542555 (thbs3)
00536 Glycosaminoglycan binding proteins [BR:
phyp00536
]
113542555 (thbs3)
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Phagocytosis
Opsonins
113542555 (thbs3)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113542555 (thbs3)
Exosomal proteins of colorectal cancer cells
113542555 (thbs3)
Exosomal proteins of bladder cancer cells
113542555 (thbs3)
Glycosaminoglycan binding proteins [BR:
phyp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113542555 (thbs3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF_LMN_ATRN
EGF_MSP1_1
EGF
Motif
Other DBs
NCBI-GeneID:
113542555
NCBI-ProteinID:
XP_026795958
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MGAMRSVPVWIVLTMMQISCLCEPLEKQDKQVIDLLALQDVKQNVAAVEKLSGALKTLSD
LYIVSTFRLPPKLGGVLLGFYNKQDNKKYLELAIMGKINKALVRYVREDGKLHTVNLQSS
NLADGRAQSIILRIGGLQRENLSLELYVNCRLADSAQRLPPLVALPAEAELVEIRNGYKA
YARLQGSVESLKLALGGTVASAGALTGCPFQGDSSSYNIVNGEVNSILGDHTKALIGQLI
IFNQILGELREDIREQVKEMSLIRNTILECQVCGFNEPRSRCQPNPCFKGVPCMETFEFP
GYRCGPCPEGMTGNGTHCQDLDECSLAQPCYSPSACVNTVKGFRCEPCPPGYWGKPVLGV
GLEYARNHKQECLDIDECVEVANACTANSVCINTIGSFKCGQCKAGYVGNQTAGCFPRKS
CATLDFNPCHSHAHCIIERNGDVSCACNVGWAGNGKTCGIDTDIDGYPDRALPCMDNNKH
CKQDNCIHTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVPNKDQQNSDTDSFGD
ACDNCPNVPNIDQKDTDNNGEGDACDQDIDGDGVQNVLDNCPKVPNPMQTDRDHDGVGDA
CDSCPEMNNPMQTDIDNDLVGDVCDTNQDSDGDGHQDSRDNCPDIPNSSQLDSDNDGIGD
DCDDDDDNDGIPDTETAIGLGPDNCRLIPNPNQKDSDGNGVGDVCENDFDNDAVLDLIDV
CPESSEVTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNG
VDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSVPFRAMAEPGLQLKA
VKSRTGPGEFLRNALWHTGDTEGEVKLLWKDPRNVGWKDKTSYRWQLSHRPQVGYIRVKL
YEGMELVADSDVVVDTSMRGGRLGVFCFSQENIIWSNLRYRCNDTVPEDFESQHKQVLMH
IQV
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaatgcgatctgtgccagtctggattgtattgaccatgatgcagatctcctgc
ttgtgtgaacctctggagaaacaagacaagcaagtgatagacctgttggctctgcaggat
gtcaagcagaatgtggctgcagtggaaaagctgtctggagcactgaagactctcagtgat
ctctacatcgtctctaccttccgcctgccacccaaacttggaggagtgctactcggcttc
tacaataagcaggacaataaaaagtacctggagcttgccataatgggcaaaatcaacaaa
gctcttgtgcggtatgttcgcgaggatggcaagctgcacacagtaaatctgcaaagctct
aacttggcagacgggcgtgctcagtccatcatcctccgcataggtggtctgcaaagagaa
aacctcagccttgagctttatgtcaactgccgcctggctgactccgcccaacgcctgcca
ccactggtcgccctgcctgcagaggcggagttggtggagataagaaatggctacaaggca
tatgctcggcttcagggatcagtggagagcctaaaactagcactcggggggactgtagct
agtgcaggtgctctcactggctgcccttttcagggtgactcctcctcatacaatatagta
aatggggaagtgaactccatccttggtgatcacaccaaagctctgattggacagctcatt
atctttaatcagatcctgggtgagcttcgagaagatatcagagagcaggtgaaggagatg
tctctcattaggaataccatactggagtgccaagtgtgcgggttcaatgagcctcgttcc
cgctgtcagcccaacccctgctttaagggcgttccctgcatggagacttttgagttccca
ggataccgctgtgggccctgtcctgaagggatgaccggcaatggcacccactgtcaagac
cttgacgaatgctcactggctcagccctgctactctccaagtgcatgtgtaaacacagta
aagggcttcagatgtgagccctgcccacctggatattgggggaaacctgtcttaggggtt
ggtctggaatacgccaggaaccacaaacaggaatgtctagacatagatgaatgtgtggaa
gttgccaatgcatgcacagccaattctgtctgcataaacaccattgggtcgtttaaatgt
gggcagtgcaaagctggctatgtgggaaatcagacggcaggctgttttcctcggaaatcc
tgtgcaacacttgactttaacccatgtcactcccatgctcactgtatcattgagaggaac
ggggacgtgtcctgcgcgtgtaatgttggctgggctggtaacgggaaaacatgtggtata
gacacagatattgatggctaccctgatcgtgctctaccctgcatggacaataacaagcac
tgcaaacaggataactgtatacacacaccaaactcaggccaggaggacgcagataatgat
ggcataggtgaccagtgtgatgaggacgctgatggcgacggcattaagaatgtggaggac
aactgccggctggtacctaataaagaccaacagaactcagacacagactcctttggtgat
gcatgtgacaactgtcccaatgtgcccaacattgaccagaaagacacagacaacaatgga
gagggcgatgcctgtgaccaagacattgatggagacggtgttcagaatgtgctggataac
tgtcccaaagtgcccaaccctatgcagacagaccgggatcacgatggagtgggagatgcc
tgtgacagctgccctgagatgaacaaccccatgcagactgacatagataatgacctggta
ggagatgtgtgtgacaccaaccaggactctgatggggatggacaccaagacagtcgagac
aactgccccgacatccccaacagctctcagcttgactcggataacgatggtattggagac
gactgtgatgatgatgatgacaatgatggaattcctgacactgagactgcgataggactc
ggtcctgataactgccggcttattcccaatccaaaccagaaagattcagatggtaatggt
gttggagacgtatgtgagaatgactttgacaatgatgcagtactggatttgattgacgtg
tgtccagagagttctgaggtcacgcttacagacttcagagcctatcagactgtcatactg
gaccctgagggtgatgcccaaattgatcctaactgggtggtgcttaaccagggtatggag
attgttcagacgatgaacagtgaccctggattggcagttggctatacagcatttaacggt
gtggactttgagggcactttccatgtaaacacagtaactgatgatgactatgctggcttc
atcttcgggtaccaggactcatccagcttctatgtagtgatgtggaagcagactgagcag
acctattggcaatctgtgccatttagagccatggctgagcctggcctacagctcaaggca
gtaaagtcccgcacagggcctggcgaatttctccgtaacgctttgtggcacactggagac
acagaaggtgaggtgaagttattgtggaaagacccacgcaacgtcggctggaaagacaaa
acctcctatcgctggcagctcagtcaccggccccaggttggctacatcagagtaaaactc
tatgagggaatggaattggtggctgactctgatgtagtggttgacacgtctatgagagga
ggtcggcttggagttttctgcttttctcaagagaacatcatctggtccaatctacgctac
cgatgcaatgacactgtcccggaggactttgagtcacagcataaacaagtactaatgcac
attcaggtgtga
DBGET
integrated database retrieval system
