Pangasianodon hypophthalmus (striped catfish): 113542644
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Entry
113542644 CDS
T05759
Symbol
ung
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113542644 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113542644 (ung)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
113542644 (ung)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113542644 (ung)
Prokaryotic type
113542644 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
113542644
NCBI-ProteinID:
XP_026796094
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MAALFINPQQCFLRTPCTRVLSKRWWNCSKYTKISSQVKKLKAGSDVALSPEQLERIARN
KAAALERLSSRRGPVGVGESWSRALGSEFNKQYFTSLLNFVDDERRKHTVYPPPEQVFTW
TRMCRIEDVKVVVLGQDPYHGPNQAHGLCFSVQRPIPPPPSLVNMYKELESDIEGFQHPG
HGDLTGWAKQGVLLLNAVLTVRAHQANLHKDKGWETFTDAVVHWLSTNLEGLVFMLWGSY
AQKKGAAINRKRHHVLQTVHPSPLSAHRGFFGCKHFSKTNELLLKSGKKPIDWKAL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgtttataaaccctcagcagtgtttcctccgcacgccatgcacaagagtt
ttatcgaaacgatggtggaattgcagtaaatacacaaagatttcgtcccaggtgaagaag
ctgaaagctggcagtgacgtggcgctgagtcccgagcagctcgagcgcatcgccaggaac
aaggcggcggctctggagcgcttgtcctcccgccgcgggcctgtgggagtcggggagagc
tggagcagagcgctgggctccgagttcaacaaacaatacttcacatcgttattgaacttc
gtggatgatgagaggcggaagcacaccgtgtatccgccgccggagcaggtcttcacgtgg
acgcgcatgtgccggattgaagatgtgaaggttgttgttcttggtcaggatccctatcat
ggaccaaatcaggctcacggcttgtgtttcagcgtgcagagacccattccacctcctcca
agcttggtgaacatgtataaagaactggagtcagacatcgaaggctttcagcatcctggc
cacggtgatctgacaggatgggcaaagcaaggtgttctgctgctgaacgctgtgttaact
gtgcgagcacatcaggccaacttgcacaaagacaaaggatgggaaacgttcacggacgca
gtggtgcattggcttagcactaacctggagggcctggtcttcatgctgtggggctcgtac
gctcagaagaaaggcgctgcgatcaatagaaaacgacaccacgtcctccagacagttcac
ccgtccccgctttctgcacaccgtggcttcttcggatgcaaacatttctcaaagaccaac
gagctgctgctgaaatccgggaaaaaacccatagactggaaagccctgtga
DBGET
integrated database retrieval system
