Pangasianodon hypophthalmus (striped catfish): 113542675
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Entry
113542675 CDS
T05759
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113542675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113542675
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113542675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF3189
Motif
Other DBs
NCBI-GeneID:
113542675
NCBI-ProteinID:
XP_026796135
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MSFSFGQATTGGGFTFGAPKTTASASAAPSFSLQTSAPAAGGFTFGAVAPQQSQAPAGTS
QIAGLLAQPTMSTAASQGGFSFGASSQSSTAGGGFNFGAAPKLGLSLTPASQPAATAVTL
GGLMTSTTSSSGTGFTFGALPTQTAPSTQQSTGGFSFPGAKVQAPAATSVQSTPSFSLGG
QSTGLTLGAVAPASAASSTGINFGIKPAATPAPAITAAAAASQAAPISSLFASPIPSAAS
TGFSLGGPTSAAAPAASSAVTASTGLTLKPLGAATTTTTTTAATTAAATAPATTSFSLGL
KPAASAAPATSTVVSTAAVTASAEPVMSYAQLESLINKWSSELEDQERHFLQQATQVNAW
DRMLVENGEKITSLHKDMEKVKLDQRRLDQELDFILSQQKELEDLLAPLEESVKEQSGTI
YMQNADEERERTYKLAENVDAQLKRMSQDLKEIIEHLNTSNSLADTSDPLQQICKILNAH
MDSLQWVEQNSVLLQRRVEEVSKLCESRSKEQEKSFRLSFQ
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcagctttggacaagcgaccactgggggtgggtttaccttcggagcccctaaa
accacagcgtcagccagcgcggcccccagcttctccctgcagacgagcgctccagcagca
ggaggattcaccttcggagcagtggctccgcagcagtctcaggccccagcgggaacatct
cagattgcggggctcctcgcacagcccaccatgagcaccgcagcctcacagggtggattc
agctttggtgcatcatcacagagcagcactgctggtggagggtttaattttggcgctgct
ccaaaactaggtctcagcctgactccagcttctcagccagccgctacagcagtgactctg
ggaggcctgatgacttccaccacctcgtccagtggcacgggcttcacattcggagccctc
cctactcagactgcaccttcaacccagcagtccacaggaggcttcagctttcccggggcc
aaggttcaggctcctgctgcaacttcagtgcagagcactccttccttctcactgggaggg
caaagcacaggtctcactctgggagctgttgctccagcctctgctgcctcgtctaccggg
attaactttgggatcaagcctgcagccaccccggctcctgctattactgctgctgctgct
gctagccaggctgcccccatatcttctctgtttgcctcccctatcccctccgctgcttct
acaggcttcagcttgggtggcccaacaagtgcagcagccccagcagcgtcttctgcagtt
acagcctccactggcttgacactcaaaccactaggagctgctaccaccaccaccaccacc
actgctgcgaccacagctgctgctactgcaccggccaccacaagcttttcactgggcctg
aaacctgctgcctctgctgcaccggccacttctacagtcgtgtccactgctgcagttact
gccagtgctgaaccagtgatgtcatatgcccagctggagtccttgatcaacaagtggagc
tcagagttggaggaccaagagagacacttcctgcagcaggccactcaggtcaacgcctgg
gaccgcatgctggtggagaatggagaaaagattacatcccttcataaggacatggagaag
gttaaactggaccaaagaaggctggatcaggagttggactttattctgtcccagcaaaag
gagctggaggatcttctcgctcccttggaggagtcagtgaaggagcaaagtggaaccatc
tatatgcagaatgctgatgaggagcgagagagaacgtataagttggcagaaaatgttgat
gctcagctgaagagaatgtcccaagatctgaaggagatcattgagcacctcaacacttcc
aacagcctggccgacacaagtgacccgctccagcagatctgcaaaatcctcaatgcacac
atggactctctgcagtgggtcgagcaaaactctgttctgcttcagaggcgtgtggaagag
gtgtccaagctgtgtgagagccgcagtaaggagcaagagaagagctttcgtctaagtttc
caatga
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