KEGG   Pangasianodon hypophthalmus (striped catfish): 113542755
Entry
113542755         CDS       T05759                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phyp03036]
    113542755 (kdm3b)
Enzymes [BR:phyp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     113542755 (kdm3b)
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    113542755 (kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 PWWP Cupin_2
Other DBs
NCBI-GeneID: 113542755
NCBI-ProteinID: XP_026796283
LinkDB
Position
Unknown
AA seq 1813 aa
MNMGDSLGLIGKRLLLLLNDGGGSAAAAAGAAANESAVQAAWLRGTVRAVSVIGLASPGV
ETTRGDVPHNLLTKSVPYKLLLRGCQYQVFLEFEDSPWRQRSWVQVYGEEVRAALMENTI
VWAPVSDSSIPAAGGTSPSHWPALVFQPLVDRVGLGSLVPVEFFGTRKLEFLPSGSSLQR
FEAEKDVRHPLLQEQPALQAAISSWHRDSELQEILRKGTYTIQGRRVQVYQPEFEEPWAQ
GLVSQHDPVTHIMEITMDQREETQVVDPRVIHVTLAVEPTDEDRRRKEADGAKGECGRRR
RTASEGDEDVTLKRFKGTGEVEPNSQTDSGSVTADCDSTDHSSSRSTGVIKENGNATLSQ
DKTGSLASTAIPTSTLTPPPLKPAPSAFSTTFPSLGQMPSLVPGAPAPKVTSTALGPERD
DGVLSAFPRSAPLISPGPVTISSPSQDNAPSVVLSATPELNQQAPVWGSLPEASQTPKTA
TLTAVGVSPSQPKQTSGAVFGDIPAQTNGASQENKEPFGFYFAKPQEPQQQASNPSQNLF
FQCMSQTQTQNPGITQGQSKDTNYFTALAKNVSKEPPTLFKPAPASEGLKKAVVASASAG
LFGSAPAGCVASVKEQPKVPDVKPAGNGILINKSFGAGGDTLGKLAPGFLPAASSSPVLG
SGDISKPALGLGTSLGLGSAALTSPGAGMRNATCASPASGFGLLSGSKGSESHENLFLAA
SKEANPFLAYTGAVPNSPFSGMTTPNLSSSVSVPQLAGGTSILNQDPPANDGQSNLFTMV
EPPKGILSSQFARCSSSSSAASCMSQHKDDQVLKHNKEATNGGTGAFVNTESVFAEGQAA
PMLFDQASQKFSLDDRGQSSKRDSDSSTNSDLSDLSEAEDATEQTQKTGMHSASTDGSDM
QKTKAHGAKNRPRSKPFKVGQSVLKDQNKVRRLKQSGEAFLQDGSCINVAPHLHKCRECR
LERYRKSREQDLEDDDPNVACRFFHFRRLAFTKKGVLRVEGFLTPQQSDSLAMGLWLPSP
NAQDGLDLDTSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCET
TLFNIHWVCRKCGFGVCLDCYRLRKNQPHDDVDDSPDDEVFSWLKCAKGQPHEPQNLMPT
QIIPGTALYNIGDMVHAARGKWGIKANCPCTSRHNKPVARPNAPNGLAQSGTASSTGNGA
ASTSATPRPDGDPVTAAAVKVEPCAEGISADTSGSSSSANNSTAGPASALTPGSKDIKGN
SSSALHWLADLATQKAKDDSKDSGSLRAMMSRDARAPFSLDAFSTLSKPAGPTPKLFNSL
LLGSGPTQPKAEGTSLRDLLNSGPGKLPQAPDGGVPFPSVFSSSAGADKAKGGLPTILDH
IIASVVENKKAEGRRVSGSTEGSESGSVARREGVMGLSVLDPHTSHTWLCDGRLLCLQDP
SNSNNWKIFRECWKQGQPVLVSGIHKKLNSGLWMPDAFSEEFGDQDVDLVNCRNCAIISD
VKVRDFWDGFQVISKRLQGADGQAMVLKLKDWPPGEDFRDMMPTRFDDLMENLPLPEYTK
RDGRLNLASRLPNFFVRPDLGPKMYNAYGLISTEDRKVGTTNLHLDVSDAVNVMVYVGIP
VGNDDHENEADPAGYKEVSITIEEGDVDEMTKRRVYEGKEKPGALWHIYAAKDAEKIREL
LRKVGEEQGQENPPDHDPIHDQSWYLDQVLRRRLYEEYGVQGWSIIQFLGDAVFIPAGAP
HQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSTTHTNHEDKLQVKNIIYHAVKDAV
GTLKAHEAKLARS
NT seq 5442 nt   +upstreamnt  +downstreamnt
atgaatatgggcgactctctgggtctgatcgggaaaagactgcttctcctcctgaatgat
ggaggaggctctgctgctgctgctgccggtgctgccgctaatgaaagcgctgtgcaggcg
gcctggctccgggggaccgtccgggcagtcagtgttatcgggctggcgagtcctggggtt
gagacaacccgaggtgacgttccgcataacctattaaccaaatctgttccctacaagctt
ctgttaagaggatgtcagtatcaggtgttcctggagtttgaggacagcccgtggaggcag
cgctcctgggtgcaggtgtacggagaagaggtccgagcagctctgatggaaaacaccatc
gtgtgggctcccgtaagcgactcgtccattcccgcagctggaggaacgtctcccagccac
tggcctgccctggtgtttcaaccacttgtggaccgtgtcggattaggatccctggttcct
gttgagttcttcggaactagaaagctggaatttctccctagtggaagttcactgcagaga
tttgaggctgagaaagatgtgaggcatccactcctacaggagcagccagcactccaagca
gccatcagcagctggcaccgggactccgagctgcaggagatactgagaaaagggacatac
acaatccagggccgaagggtgcaggtgtaccagccagaatttgaagaaccgtgggcgcag
gggcttgtgtctcagcatgatcctgtcacgcacattatggaaataaccatggaccagaga
gaagagacccaggtagtcgatccacgagtcattcatgtaacgcttgctgtggagccaaca
gatgaggatcgacgaaggaaagaggcagatggagcaaagggtgagtgtgggcgtcgacgt
cggacagcttctgaaggagacgaagacgtgaccctgaaacgattcaaaggaacaggggag
gttgagccaaatagccaaactgacagcgggtcagtgacggcagactgcgactcaacggac
cattccagcagcaggtctactggggtcattaaggagaatggcaacgccaccctgagccaa
gacaaaacaggttctctggcatccacagcaattcccacatccaccttgactccgcctcct
ctgaagcctgctccatctgccttttctaccacgtttccatctttggggcagatgccaagt
ttggtgcccggagctcccgcacccaaggtcacttccacagccctgggacctgaaagggac
gatggagttctttcagcctttcccagatctgctcctctgatatccccaggccctgtcacc
atctcttcgccctcccaggacaacgctcccagcgtggtcctttctgcaaccccagaactc
aaccagcaagcacctgtttggggatcgctcccagaagcaagccagacacccaagacagcc
accctcactgctgtgggagtcagtccttcccagcctaagcagaccagtggggctgtgttt
ggtgacatccctgcacagacaaatggagcttcccaggagaacaaggagccctttggattt
tattttgctaaaccacaagaacctcagcagcaggcatctaatccctcacagaacttattc
tttcagtgtatgtctcagacgcagactcagaacccaggcatcactcaaggccagtcaaag
gacactaactacttcacagccttggcgaaaaatgtcagcaaggagccaccgacccttttt
aagcctgcccctgcttctgagggcctaaaaaaggctgttgttgcctctgcatctgcagga
ctgtttggttctgcaccagctggttgcgtggcatctgtgaaagagcagcccaaagtgcct
gatgtcaagccagcaggtaatggaattctaataaacaaatcatttggagcaggaggagac
acactggggaaattggcccctggtttcctgcctgctgctagcagcagccctgttttgggt
tcaggggacatttctaaacctgctttagggctcgggacctctctgggattgggctccgct
gcactgactagtcctggtgctggtatgagaaatgctacttgtgctagtcctgctagtgga
tttggtctgctttcaggcagcaagggttcagaatctcatgagaacctgttcctggcagcc
tcgaaagaggctaatccatttcttgcttataccggagcagtcccgaatagtccatttagc
gggatgaccactccaaatctgtcgtcgtcagtgtccgttcctcagcttgcaggtggcacc
agtattcttaaccaagatccccctgccaatgatggccaatcaaatttattcaccatggtc
gaacctcccaaaggaatcctatcttcccagtttgccaggtgttcttcttcctcttctgct
gcgtcttgtatgtcacagcacaaagatgaccaagtgctcaaacacaacaaagaggccacc
aatggtgggactggagccttcgtcaatactgaaagcgtgtttgcagagggtcaggcagcc
cccatgctctttgaccaagcgtcgcagaagttctctctggatgatcgtggtcagtcgagc
aaaagggactcggactccagcacaaacagtgacctgtctgacctgagtgaggctgaagat
gccactgaacaaacccaaaagactggcatgcactcggcatctacagacgggtctgatatg
caaaagaccaaagcccatggtgctaagaacagaccaaggagcaaaccctttaaagttggt
cagtcagtactgaaggaccagaataaggtgcggcgtctaaagcagtctggtgaagccttc
ctgcaggatggctcctgcataaacgtggctccacacctacacaagtgcagagagtgtcgc
cttgagcgctaccgtaaatcccgtgagcaggatttggaggatgatgaccccaacgtggcc
tgccgcttcttccacttccgtaggctagcgttcacaaagaagggggtgcttcgtgtggag
ggcttcctgaccccacagcagagtgacagcttggcaatgggtttatggcttccttcccca
aatgcacaggatggcctcgacctggacacatccaagtatattctggccaacgtgggtgac
cagttctgccaactcgtcatgtccgagaaagaggccatgatgatggtggaacctcatcaa
aaggtggcgtggaagagggcagttaggggtgtgagggagatgtgcgatgtgtgtgagacg
actctcttcaacatccactgggtgtgtcgcaaatgtggttttggtgtatgcctagattgt
taccggctacgaaagaaccagccacatgatgatgtagatgacagcccagacgatgaagtc
ttctcctggctgaagtgtgcaaaaggccagcctcatgaaccccagaacctcatgcctact
cagattatacctggcacagcactctacaatataggtgacatggtacacgcagcgcgaggc
aagtggggaattaaagccaactgtccttgcaccagccggcacaacaaacctgtggcgcgg
cccaatgcgccgaatggccttgcacaatcaggtacagcctctagcacaggtaacggggct
gcgtccacttcggcaacacctcgtccagacggggaccctgtgacagctgcagcagtgaaa
gtagagccctgtgcagagggaatcagtgctgacacatctggcagcagcagcagtgctaac
aacagcacagcagggcctgcaagtgcccttacccctggttctaaagatatcaagggtaac
tcctcctctgcgctgcactggctggctgacctagccacacagaaggcgaaagacgactct
aaagactccggctccctccgggccatgatgagtcgtgatgcacgtgctcccttcagtctg
gatgcattcagcactctatccaaaccagcaggccccactcccaagcttttcaacagctta
ctactgggctctgggccaacccagcccaaagctgagggcaccagcctgcgggacctgctc
aactccggtccaggcaaactgccccaggcccccgatggtggagtcccctttccatcagta
ttctcctcctcagcaggggctgataaagcaaagggaggtctacctaccatcctggaccac
atcattgcctctgtggtggagaacaagaaagcagagggtcgccgtgtctcggggtcgacg
gagggcagtgagtcgggcagtgttgcacgtagagaaggggtgatgggcctgagcgtgctc
gatccccacacctctcacacgtggctatgtgatggtcgtctcctctgcctgcaggacccc
agcaacagcaacaactggaagatcttccgtgagtgctggaaacagggccagccggtgctg
gtgtcaggcatccacaagaagcttaacagtggcctgtggatgccggatgctttcagtgag
gagttcggagatcaggatgtagacctggtcaactgcaggaactgtgcaatcatctctgac
gtcaaggtccgagacttctgggacggcttccaggtcatctccaaacggttgcaaggtgcc
gatgggcaggcaatggtactgaaactcaaagactggcctccgggagaagatttccgagac
atgatgcctacacggtttgatgaccttatggagaaccttcctctacccgagtatacaaag
agagatggacgactaaacctggcatcccgtcttcctaacttctttgtgcggccggatctg
ggccccaagatgtacaacgcctatggtctgatatcaacagaggacaggaaggttggcacc
actaacctgcatctggacgtgtctgatgctgttaacgtgatggtgtatgtggggatacct
gtgggcaatgatgatcatgaaaatgaagcagaccccgctggatacaaagaggtgtcgatc
accatcgaggagggtgacgtggatgagatgacgaagaggcgggtgtatgaggggaaggag
aagccgggagcactctggcacatctacgccgctaaagacgctgagaaaatccgtgagctt
ctacgcaaggtgggagaggagcagggtcaggagaaccctccagatcacgaccccatccac
gaccagagctggtatctggaccaggtgttgcgccgccgcctgtatgaagaatacggagtt
cagggctggtccatcatccagttcctgggagatgctgtgtttattccagctggagcgcct
catcaggtgcacaacctgtacagctgcattaaggtagctgaggatttcgtctcacccgag
cacgtgaaacactgcttcagactgacgcaggagttccggcatctttcaaccacacacaca
aaccacgaggacaagctgcaggtgaagaacatcatctaccacgctgtgaaggacgccgtg
ggaacgctgaaagctcatgaagcaaagctggcccgttcatag

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