Pangasianodon hypophthalmus (striped catfish): 113542765
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Entry
113542765 CDS
T05759
Name
(RefSeq) syntaxin-3-like isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
113542765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113542765
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113542765
Membrane trafficking [BR:
phyp04131
]
SNARE
Syntaxin (Qa)
Stx-PM
113542765
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
113542765
Exosomal proteins of other body fluids (saliva and urine)
113542765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Relaxase_C
FlaC_arch
Neurensin
DUF3040
DUF6584
FUSC
ArAE_1_C
Baculo_PEP_C
IL2
APG6_N
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
113542765
NCBI-ProteinID:
XP_026796307
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MKDRLEQLKATCDHDDEDVQIAVVNPAFMDDFFSQIEEIRISIDKIDENVAEVKKLYSVI
LSAPTSDQKTQDDLEALTNDIKKMANNARNKLKTIERDLETGEEERVSADMRIRKSQHAV
LSRKFVDVMTKYNEAQVDFRDKSKGRIQRQLEITGKVTTDEELEEMLEGGNAAVFTAGII
DSGISKQALSEIESRHKDIVRLESSIKELHDMFLDIAMLVESQGDIIDNIEANVSKTVDH
VAVAKIETKKAVRYQSKARKKVVIIVCVVLVLLGIIALIIGLSIGLRQA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgactggagcagctgaaggcgacttgtgaccatgatgacgaggatgttcag
atcgctgtggttaacccagcgttcatggacgattttttttcccagattgaagaaatcaga
atcagcattgataagattgatgaaaatgtagctgaagtgaagaaactttattccgttata
ctgtctgcgccgacatctgatcagaaaacacaagatgacctggaggcccttaccaatgac
attaagaaaatggcaaacaacgcacgcaacaagctgaagaccattgagagggatcttgag
acaggggaagaggaacgagtgtcagctgacatgagaatacgcaaatcacagcatgcagtt
ctctccaggaagtttgtggatgtgatgacgaaatacaatgaagctcaggtggacttcaga
gacaagagcaaaggacgtatccagagacagttagagatcactggtaaagtcactactgat
gaggagctggaggaaatgttggaggggggcaatgcagcggtcttcactgctgggatcata
gattcaggaatctccaagcaggcgctgagcgagatcgagtctcgtcacaaagacatcgta
cggctggagagcagcataaaggaactacacgacatgttcttggacatcgccatgctcgta
gagagtcagggtgacatcattgataacatagaagcgaatgtgtcaaaaacagtggatcat
gttgcagtagcaaagattgaaacaaagaaagcagtcaggtatcagagcaaagcacggaag
aaagtggtgattatagtgtgtgttgtattggtgcttcttggcatcattgctttgataata
gggctgtctataggacttagacaggcataa
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integrated database retrieval system
