Pangasianodon hypophthalmus (striped catfish): 113542773
Help
Entry
113542773 CDS
T05759
Symbol
dcaf10
Name
(RefSeq) DDB1- and CUL4-associated factor 10 isoform X1
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113542773 (dcaf10)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113542773 (dcaf10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WDR55
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_like
RMC1_N
Beta-prop_VPS8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_TEP1_C
Omptin
Motif
Other DBs
NCBI-GeneID:
113542773
NCBI-ProteinID:
XP_026796325
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MSSGQPSDSSEPEEARLTRDSDELFREDESEEEEEEEEEDVRSRPSSPESRRENSRAKAS
SRPESAADGGAPSPGFRTSSARESLFSWLRNRSVRRGPLVDPARDNFRTMTRLYSSMSPA
TDSVNLSTQTHGAVFNLEYSPDGSVLTVACEQTEVLLFDPVSSRHIKTLVEAHEDCVNNI
RFLDNRLFATCSDDTTIALWDLRKLNSKVCSLHGHASWVKNIEYDTHTRLLVTSGFDGNV
ITWDTNRFTEDGCPHKKFFHTRYLMRMRLTPDCSKMLISTSSGYLLILHDLDLTQSLEVG
SYRILRARRAPLSTEGSSTGSRTSGSRHGNDSKAHPHREGLSPRNSLEVLTPEIPGERDR
GNCITSLQLHPKGWATLLRCSSNMDDQEWTCVYEFQEGAPPRLPVSPRCSLRLTHYIEEA
NVGRGYIKELCFSPDGRLICSPYGYGVRLLAFDERCGELEECVPERTALLREVRSIYSHS
DVVLTSKFSPTHCQLASGCLSGRVALYQPHF
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgggccaaccgagcgacagcagcgaaccagaggaagctcggcttacccgcgac
tccgacgaactgttccgagaggacgagagcgaggaagaggaggaggaggaagaagaggat
gtccgctcgagaccgtcgtctccggagagtaggcgcgagaattcccgagctaaggctagc
tcgcggcctgaatcagcggcggacggcggagctccgagccccggcttcaggacctccagt
gcgcgcgagtcgctcttctcatggctgcggaaccggagcgtgcgcagagggccgcttgtg
gatccggcccgggataactttcggactatgactcgcctttattcatccatgagccccgct
acggactcggtgaacctcagcacccaaactcacggtgccgtgtttaacctggagtactcc
ccggacgggtcggtgctgactgtggcctgtgagcagacagaagtgctgctgttcgatcct
gtttcctccagacacatcaaaacgctggtggaggctcatgaggactgcgtgaacaacatc
aggtttctggataaccggttgtttgccacctgttctgatgacaccaccattgcattgtgg
gacttgagaaagctgaactcaaaggtgtgttcattgcacggccatgctagctgggtgaag
aatatcgagtatgacacacacacgcgcttgcttgttacgtctggctttgatggaaatgtc
atcacctgggacaccaacaggttcacagaagacggctgtccccataagaagttctttcac
acgcgctatctgatgcggatgcgtctaacgccggactgcagtaagatgctcatctccacc
tcctctggttacctgctcatcttgcatgaccttgacctcacccagagcctagaggtcggc
agctaccgcatcctacgggcgcgacgtgccccactcagcactgaaggttcttcaacaggc
tccaggacgtcaggctctcgccatggcaatgacagcaaagcccatcctcatagagagggt
ttgtctcctaggaacagtctggaagttttgaccccagagatcccaggtgagagggaccgg
gggaactgcatcacttcactgcagcttcaccccaaaggctgggccacactcctgcgctgc
tccagcaacatggatgaccaggagtggacgtgtgtgtacgagtttcaggaaggagctcct
cctcggctgccggtctcacctcgctgctctctgcggctcacgcactacattgaggaggcc
aacgtgggccgtggctacatcaaggagctgtgcttcagcccggacggtcgccttatctgc
tctccatacggttacggcgtgcgtctgctggcctttgacgagcgctgcggggagcttgag
gagtgtgtgcctgagcgtacggcgctgctgcgtgaggttcgctcaatctactctcacagt
gacgtggtgctcacctccaagttctcgcccacacactgtcagctggcctcaggctgcctc
agcggacgtgtagcactctaccaaccccacttttaa
DBGET
integrated database retrieval system
