KEGG   Pangasianodon hypophthalmus (striped catfish): 113542800
Entry
113542800         CDS       T05759                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04382  Cornified envelope formation
phyp04510  Focal adhesion
phyp04512  ECM-receptor interaction
phyp04514  Cell adhesion molecule (CAM) interaction
phyp04518  Integrin signaling
phyp04810  Regulation of actin cytoskeleton
phyp04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113542800
   04514 Cell adhesion molecule (CAM) interaction
    113542800
   04518 Integrin signaling
    113542800
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113542800
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113542800
   04810 Regulation of actin cytoskeleton
    113542800
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    113542800
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113542800
   04515 Cell adhesion molecules [BR:phyp04515]
    113542800
   04090 CD molecules [BR:phyp04090]
    113542800
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113542800
  Exosomal proteins of breast milk
   113542800
Cell adhesion molecules [BR:phyp04515]
 Integrins
  Integrin alpha subunits
   113542800
CD molecules [BR:phyp04090]
 Proteins
  113542800
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 DUF4825
Other DBs
NCBI-GeneID: 113542800
NCBI-ProteinID: XP_026796370
LinkDB
Position
Unknown
AA seq 1040 aa
MEGRRITLIMNLWLLSSLNLQHASAFNLDNTTVLRKNGEAGSLFGYSLAMHHQLKPTDQQ
LLLIGAPHAKALPSQKANITGGLYRCKFTMQSDDCERIPVDTEDAKPGQGIDHRENQWMG
VQVKSQGPGGKVVVCAHRYQQWIHNNQLVLGRCFILEQNLIVEDTRTFCRNRPKAKDLFG
YCQQGVSAAFTKDKKYIVFSGPGAYDWKGAVRMEPIEDFLLDPYETGDQNVFNERRIPLA
ISSLLGFALDSGTNLLKKEEQVIVAGAPRSNLSGDVLFLKPEAVEDQRSLRVAHILQGPG
LASSFGYSLAVIDLNADGWDDLVVGAPQYSLTDMEAGRGGAVYVYVNRQDGRDWDRLQPD
ILTGNKDSMFGLAVANIGDINHDGYNDFGVGAPYDNNGDGAVYIYLGKTGHFSQKDNQVL
QGKSHKVKLFGYSLAGNMDIDGNGYPDLAVGSLSDSVLVYRSKPVISIEKSLTLAPSEMN
FQERDCHKGHCIITAESCFSHTTYPGTYNPRLQILYKLNADEQWVQGGHQSRLVFQNNHE
GKIVLQTQGQKQCVQSRLRLRANTMDKLTEIPVSVSVSLLPNSPPQTLSQSSLPALQPVL
NDLQPQESTAKFMFLNPGCGSDNICQSNLQLQYSFCTKDQHRDGWSPLAREDGVAVISPG
AGNTALEITVTNRGGDDAHLAQLVANFPESLPLSSVILKQDSKLNVQCDVDGSKTRAECN
LGNPFKRNAEVTFYLLLNTDRLTPSITDVNVTLNLQTISVQNISEIVAEAQVFFELYLQV
FGLAKPSQVYYREVKKNKSYEEIGEPVQYEFTISNMGRPLKSFASATLNIQWPKENKEGK
WLLYLLQITGPNNQSIPCSPASEISPLKHAQEVMSRRKRQAEASALSTDGLLSLFGGKRH
YKYLACGDELKCVELRCPLKAADRTAVTLHARLWSSTFVEEYRSLNYLDIVLNASLSLDG
SQKNIRLQESQTQVRLTVFPEKKPTFLSRVPWWVILLTVVLALLLLSLLIYFLSKMGCLK
CAMCTENKGYHSINENHARK
NT seq 3123 nt   +upstreamnt  +downstreamnt
atggagggacggagaataacactgatcatgaacctgtggctcctcagtagcctgaatctg
caacatgcatctgctttcaacctggataatactactgttctgaggaagaacggagaggct
gggagtctgtttggatattccctcgcaatgcaccaccaactcaaacctactgatcagcaa
ctcttgctgattggtgctccacatgcgaaagccttacccagtcagaaagcaaacataact
ggaggtctctatcgctgtaagttcacaatgcagagtgatgactgtgaacggatccccgta
gacactgaagatgcaaagccagggcagggaatagatcaccgggaaaaccagtggatgggt
gtgcaggtgaaaagccagggcccaggaggaaaagtagtggtttgtgctcaccgctaccag
cagtggatacataacaatcagctggtcctgggcaggtgtttcatcttggaacagaaccta
attgttgaagacacgaggacgttctgccgcaatcggcccaaagctaaggacctgttcggt
tactgccagcagggcgtctctgcagctttcaccaaggacaagaaatacatagtgttctca
gggccaggtgcctacgactggaaaggtgctgtccgcatggagcctattgaagactttctt
ctggatccctatgaaaccggagaccagaatgtgtttaatgaaaggcgcattcctctggcc
atcagcagccttttaggctttgctctggactcagggacgaatctgttaaagaaagaagag
caggttatagtggctggagcaccacgctccaatctcagtggtgatgttctgttcttaaag
cctgaagctgtggaagatcagaggagtctgcgtgtagctcacattctccaaggcccgggt
ctggcgtcctctttcggctactcactggctgtaatagacctcaatgcagatggatgggat
gatcttgtggttggtgctcctcagtacagcttgacggacatggaggcaggaagaggaggc
gctgtttacgtctacgtaaaccgtcaagatggccgagactgggacagattacagccagac
attcttactggcaataaagactccatgtttggactagcggtggcaaacattggggacatc
aatcacgacggatacaacgattttggagttggagcaccttatgataataatggtgatggt
gcagtgtacatttacctcggcaaaactggacacttttcacagaaagacaaccaagtttta
cagggtaaatcccataaagtcaagctgtttggctattccctggctggaaacatggatata
gatgggaacggctatccagacttagccgtgggctcactttctgacagtgtacttgtctac
aggtctaaaccagtgattagcattgagaaatccttgacattagcacctagtgagatgaat
ttccaggaaagagactgccataaaggtcactgcattataacagctgaatcctgcttctcc
cacacgacctatccagggacatataaccccagattgcagattctctacaagctaaacgct
gatgaacagtgggttcaaggtggtcatcagtcccgcctagttttccagaacaatcatgaa
ggaaaaattgtgctccagacacagggtcaaaaacaatgtgttcaaagccgcctccgactc
cgggccaacaccatggacaagcttacagaaatccctgtcagtgtgtcagtgtctctgctg
ccgaacagtcctcctcagacactgagccaaagctctctacctgctctccagccagtgctc
aatgatctccagcctcaggaaagcacagcaaaattcatgtttttgaacccaggatgtgga
agtgataatatctgtcagagtaacctgcagctgcagtacagcttctgcaccaaagaccaa
catcgggatgggtggtcaccactagccagggaggatggagtggcagtgatctcccctggt
gctgggaacacggccctggagatcactgtaacgaatcgcggaggagatgatgctcatctc
gctcaactggttgcaaattttccagaatctctacctttatcatcggtcatcctcaaacaa
gatagtaaactgaacgtgcagtgtgatgtggatgggagtaaaacaagagcggaatgtaat
cttggaaatcctttcaaaagaaatgcagaggtaacattttatctcttgctaaacactgat
cgtctgaccccgagcataacggacgtgaacgtgacactgaatctccagacgatcagcgtg
caaaatatttcagaaatcgttgcagaggctcaagttttctttgagttgtatctgcaagtg
tttggactggccaaaccttctcaagtgtattatcgagaagtgaagaagaacaaatcatat
gaggagatcggagaacctgtgcagtacgagtttacaatcagtaacatgggtcgacctctg
aagtccttcgcctccgcaaccctcaacatccagtggccaaaggagaataaagaaggcaag
tggctcctgtacctgctgcagatcaccggaccgaacaaccagagcatcccatgcagtcca
gcctcggaaatcagccctctcaaacatgctcaggaggtgatgtccagacgaaaacggcaa
gcagaagcctcagctctcagcactgatggactcctgtccttatttggaggcaaaagacat
tacaaatatctggcatgtggtgatgagttgaagtgtgtggagctcagatgccccctaaag
gcagcagatagaactgcagttactctgcacgcacgactgtggagcagcacttttgttgag
gaatacagatccctgaattatctggacattgtactaaatgcttctctcagtcttgatgga
tctcaaaagaacatcaggcttcaggaatctcaaacacaggtgagactgacagtgttccca
gagaagaagccgacttttctcagtcgagtcccctggtgggtgattctgctcaccgtggtg
cttgcactgttgctactcagcctcctgatctacttcctgtccaagatgggatgcctcaaa
tgtgcgatgtgtactgaaaataaaggatatcatagcattaatgaaaatcatgctagaaaa
tag

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