Pangasianodon hypophthalmus (striped catfish): 113542805
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Entry
113542805 CDS
T05759
Name
(RefSeq) ras-related protein Rab-33B-like
KO
K07920
Ras-related protein Rab-33B
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113542805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113542805
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113542805
04031 GTP-binding proteins [BR:
phyp04031
]
113542805
Membrane trafficking [BR:
phyp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
113542805
Others
Specific organelles associated proteins
Auto phagosome
113542805
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113542805
GTP-binding proteins [BR:
phyp04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
113542805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
SRPRB
MMR_HSR1
G-alpha
PduV-EutP
ATP_bind_1
Septin
AAA_22
TniB
AAA_25
Thioredoxin_14
Motif
Other DBs
NCBI-GeneID:
113542805
NCBI-ProteinID:
XP_026796376
LinkDB
All DBs
Position
Unknown
AA seq
233 aa
AA seq
DB search
MADMESSLEFSSSLTCSTLPPPRTRIFKIIVIGDSGVGKTCLTYRFCAGKFPDKTEATIG
VDFREKIIEIDGEKIKVQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDVTSAASFRNLPA
WIEECRQHALGHEVPRILVGNKCDLRHAAQVSTEVAQQFADAHSMPLFETSAKSPQGESN
DSDHVEAIFMTVAHKLKSQKPLVLSQPANTVILRGRDQEEEQRGSWGCTCWRS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatggagtcttctctggagttcagcagctctctgacctgctccacgctgcct
cctccccgcacccggatctttaagatcatagtgatcggagactccggggtgggaaagacc
tgcctcacataccgcttctgcgcgggcaagttcccggacaaaaccgaggccaccatcggg
gtggacttccgggagaagatcatcgagatcgacggagaaaagatcaaggtccagctgtgg
gacacggcgggtcaggagcgtttccggaagagcatggtgcagcactactacagaaacgtg
cacgccgtggtgtttgtgtacgacgtgacgagcgcggcgagtttccgcaacctcccggcg
tggatcgaggagtgccggcagcacgcgctcggccacgaggtgccccgcatcctggtgggc
aacaaatgcgacctgcgccacgccgctcaggtgagcacagaggtggcccagcagttcgca
gacgcccactccatgcctctgttcgagacgtcagctaagagcccgcagggagagagcaac
gacagcgaccacgtggaagccatcttcatgacggtggcgcacaagctgaagtcgcagaag
ccgctggttctgagtcagccggccaacacggtcattctgagggggcgggatcaggaggag
gagcagcgtgggagctggggctgcacctgctggaggagctag
DBGET
integrated database retrieval system
