Pangasianodon hypophthalmus (striped catfish): 113542840
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Entry
113542840 CDS
T05759
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113542840 (rlim)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113542840 (rlim)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113542840 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
SPT6_acidic
Prok-RING_4
zf-RING_16
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
113542840
NCBI-ProteinID:
XP_026796431
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MEGSDNADQGSSEQADSQRRQQQDRLHREEAFYQFVNNLSEEDYRLMRDNNLFGTPGKIT
EEELLNRLHQIRDGPEQPHSSNSSSNSPQVSRGEPRVSEAEGTEEASNGDNLLDWLNTVR
QTGNTTRSGHRGNQSWRAVSRTNPSSGDFRFSLEININRNIAEQQTQTEADRLDAEQSRT
DGTVSEPETPMEAAEVVEEPVVEEMAVIVEPELPAPNSPAVTRPTSPQNQLPTSPSLPQV
ERPSRGQIRARSPSPEQRRTRARTARSHLALSLDQLDGLPQARHGLPSRSPDPVPEVQVD
GSSRTRLHVLSRQNIQLENEETIATTEPQPAPQPHQEVETPSGETGASARRPPTIMLDLQ
VRRVRPGEYRERDSIANRTRSRSQTSNNTFLYETERGGFRRTFSRSERAGVRTYVSTIRI
PIRRISDAGLGEATSMALQSMIRQIMTGFGELSYFMDSDSDSTDSSRGSNPAADLADALG
NPDAGSPSTVTEPSLGAGGSIQSGSEAQTEEREDSGAALRESRARQRAPVSLEDSGSLPF
LRLAHFFLLNDEDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPC
SHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcagacaatgcagatcagggcagtagtgaacaggccgattcacaacgcagg
caacagcaggaccgccttcaccgagaggaggccttctaccagtttgttaacaatctgagt
gaggaggactacaggctgatgagagacaacaatcttttcggcacaccaggtaaaattacc
gaggaagagttgttaaaccgccttcatcaaattagggatggccctgaacagccacatagt
agcaacagcagcagcaacagtcctcaagtcagtaggggggagcccagagtttctgaggca
gagggtacagaagaagcatccaatggcgacaaccttcttgactggctcaacactgtgcgt
caaacgggcaacaccacaagaagcgggcaccggggcaaccagtcatggcgggcggtgagc
cgaaccaatccaagtagtggagacttccgcttcagcttggagatcaacatcaatcgcaac
atagctgagcagcaaacacagactgaggccgatcggctagacgcagaacaaagccgcact
gatggcactgtatctgaacctgagacacccatggaggcggcagaggtggttgaagagcca
gtggtggaggagatggctgttatagtcgagccagagcttcctgcacctaatagcccagct
gtaacccggccgacaagcccacaaaatcagctcccaacttctccaagtctgcctcaagta
gaacgcccaagtagaggccagattagagcccgtagtccaagcccggaacagcgcagaacc
agggcgcgaacagctaggagtcatttagctctcagcctggaccagttagatgggcttccg
caggctcgccatggtctaccctctcgaagtcctgatcctgtccccgaagttcaggtagat
ggcagctccaggacacgactccatgttctttctcggcagaatatacagttagaaaatgag
gaaactatagcaactacagagccccaaccagcacctcagccccaccaggaagttgaaacg
ccttcaggagaaacaggtgcttcagcccgacgtcctccaacaataatgctggatttgcag
gttcgtagagtgcgaccaggtgagtaccgcgagagagacagcattgccaaccgtacccgc
tctcgatcacagacctcaaacaacactttcttgtatgaaaccgagcgtggaggctttcgc
aggaccttttcacgttcagaaagggcaggtgtgagaacgtacgtcagcactatccgtatt
cccatcaggaggatctcagatgccgggcttggtgaggccacctccatggccctgcagtcc
atgatccggcagatcatgactggctttggtgaactcagctacttcatggactctgactcg
gactccacagactcaagccgtggctccaaccccgcggcagatcttgctgacgcgctggga
aatccagatgctggaagtccctctactgtgactgagccatcacttggggcaggaggctca
attcagagtggctcagaagcacagactgaagagagggaggacagtggtgcagctctgaga
gagagcagggcaaggcaacgagctcctgtcagcctagaggattccggctctttgcccttt
ctgcgacttgcacatttcttcttgctcaatgatgaagatgatgatcagcccaggggcctc
accaaagagcaaatcgataacctttccatgcgcaatttcggtgagagtgatgcactcaag
acctgtagtgtctgcattacagagtatgctgaaggcaacaagcttcgcaaacttccctgc
tcacatgagtatcacgtgcattgtattgaccgttggctttcagagaattcaacttgcccc
atttgtcgcagggcagtccttgtttctgccaacagagagagcgttgtttag
DBGET
integrated database retrieval system
