KEGG   Pangasianodon hypophthalmus (striped catfish): 113542916
Entry
113542916         CDS       T05759                                 
Name
(RefSeq) centrin-1-like
  KO
K10840  centrin-2
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    113542916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:phyp03019]
    113542916
   03036 Chromosome and associated proteins [BR:phyp03036]
    113542916
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113542916
Messenger RNA biogenesis [BR:phyp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     113542916
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    113542916
   Centrosome duplication proteins
    Centriole replication proteins
     113542916
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      113542916
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 EF-hand_5 AIF-1 EF_EFCAB10_C EH Dockerin_1 SurA_N_3 DUF7645 SUB1_ProdP9 EF-hand_14 dCache_2 SRI RTP MgtE_N DUF5580_M MJ1010-like_2nd
Other DBs
NCBI-GeneID: 113542916
NCBI-ProteinID: XP_026796571
LinkDB
Position
Unknown
AA seq 172 aa
MATSAKRPSLGAVAPRKKASPKPELTEEIRQEIREAFELFDTDGSGYIEVKELKVAMRAL
GFEPKKEEIKKMIADVDKDGTGKISFDDFLAIMSQKMAEKDSKEEILKAFRLFDDDETGK
ISFRNLKRVAKELGENLTDEELQEMIEEADRDGDGEVSQQEFLRIMKKTCLY
NT seq 519 nt   +upstreamnt  +downstreamnt
atggccaccagtgccaaaaggccatcgcttggagctgtggctcctcgtaagaaagccagt
cctaaacccgaactgacagaagaaataaggcaggagatacgagaagctttcgagctgttc
gacacagatggctcaggctacattgaggtgaaggagctgaaggttgctatgagggctctc
gggtttgagcccaaaaaagaggagatcaagaaaatgattgcagatgtagataaggacggc
actggcaagatctcgtttgatgacttcctggcaatcatgagccaaaagatggctgaaaag
gactccaaagaagaaatcctcaaggcctttcgactgtttgatgatgatgaaactggtaag
atatcattccgcaacctaaagcgagttgccaaggagcttggcgagaaccttactgacgag
gagcttcaggagatgattgaagaagcagaccgagatggtgatggagaagtgagccagcag
gagtttcttcgtatcatgaaaaaaacgtgtttgtactga

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