Pangasianodon hypophthalmus (striped catfish): 113542940
Help
Entry
113542940 CDS
T05759
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113542940
03036 Chromosome and associated proteins [BR:
phyp03036
]
113542940
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
113542940
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
113542940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
113542940
NCBI-ProteinID:
XP_026796598
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MGDTLEFNEIYQEVKGCWNDGRLRFSKQSVVYKSSKTGKVDSIPASDLSLAQWRRVCLGH
GIKLATSNGHVYKYDGFKDTDFEKISAFFKTNYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDINDSPAFEIPLANVSQCTTGKNEVTVEFHQNDDAEVSLMELRFYVPPTTGDDGTDPVE
VFSQNVLSQADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDVNLTLSMSEEEVERRFE
GKLNKHMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKATSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGLKEDIKATGGYSDSDEDEHDAYLERMKEEGKIREEGDESEGDSDESFNPG
EEDDDIAEEYDSNASVSDSEAEDDDSEDEGKKKKVEKKPKKPVKEKKERKPRKEKKVKDA
GAPKRPMSAYMLWLNANRERIKSENPGISVTEISKKAGEMWKQIDKSRREEWEKKAEEAK
RQYDRAMKEYKESGGGASSSAVKEKKKKGGKVDEKKRKSGGEKERDRGGNESFKSKEFIS
SEESSSDSDRGKRKKRKADEDDEDEEEVASTPPSSEEESGSD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagttcaatgagatttatcaggaggtgaaaggatgctggaatgat
ggccgcttgaggttcagcaaacagtctgtagtctacaaaagcagtaagacgggaaaagtg
gacagcatccctgcctctgatctgtctctcgcacagtggcgtcgcgtctgtctcggacat
ggaatcaaactggccacgagcaacggtcacgtctacaaatatgacggcttcaaagacacg
gactttgagaaaatctctgcattttttaagaccaactacaaagttgagctgacagaaaag
gacatgtgtgtgaaaggctggaactggggaactgccaaattctcaggaccgctgctgtca
ttcgacattaacgacagtcccgcattcgagatccccctggccaacgtatcgcagtgcacc
acgggaaagaacgaggtcacggtggagttccatcagaacgatgacgccgaagtgtcgctc
atggagctccgcttttacgtcccgcccaccacaggagacgacggcacagaccctgtagag
gttttttcccagaatgttctctctcaggcagatgttattcaggctactggagatgctgtg
tgtatcttcaaagaactgcagtgccttacacccagaggaaggtacgatattcgtatctat
cccactttcctacatctgcatggtaagacgtttgactataagatcccctacaccaccgtc
ctgcgcctcttcctgctgccgcataaggaccagaggcagatgttctttgtgatcagcttg
gatccacccattaagcagggccagacacgctatcatttcctcatcctcctcttctccaaa
gacgaagacgttaacctcactctcagcatgagcgaggaggaggtggagaggcgctttgag
ggaaagctgaacaagcacatgtccggctctctgtacgagatggtcagcagggtcatgaag
gctctggtcaacagaaagatcacggtgcctggaaacttccagggtcattcaggtgctcag
tgcatcacatgctcgtacaaggctacctcggggctgctgtatcctctggagaggggcttt
atttacgtgcacaaacccccggtgcacctgcgctttgaggagatctcctgcgtgaacttc
gcccgaggcaccaccaccacgcgctccttcgactttgagatcgagaccaagcagggcaac
cagtacaccttcagcagcatcgagagagaggaatacggcaagctgtttgactttgttaat
gccaagaagctgagcatcaagaacagaggcttgaaggaggacataaaggcaaccggtggc
tacagtgactccgacgaggatgagcacgacgcttatttggagaggatgaaggaggagggt
aaaatcagagaggagggagacgagtcagagggtgacagtgacgagtccttcaatcctggc
gaggaagatgatgatatcgctgaagaatatgacagtaatgcctcggtgagcgacagcgaa
gcagaggatgatgatagcgaggatgaagggaagaagaaaaaagtcgagaagaagcccaag
aaaccggtgaaagagaagaaggagagaaaaccacgcaaagagaagaaggtgaaggacgca
ggagcccctaagaggcccatgagcgcctacatgctgtggttgaacgcgaacagagagcgg
atcaagtctgagaatcctggaatctctgtcacggagatctccaagaaagccggagagatg
tggaaacagattgacaaaagccgcagagaggagtgggaaaagaaggcagaagaagctaaa
agacaatatgacagagcaatgaaagaatataaagaaagtggcggaggagcttcatcatct
gcggtcaaggaaaagaagaagaaaggcgggaaagtggatgagaagaaaaggaagagcgga
ggagagaaggagcgagacagaggaggaaacgaaagctttaagagcaaagagttcatttct
agtgaggagagctcatcagattctgatcgcggcaaacgcaaaaagcgcaaggctgatgaa
gatgatgaggatgaggaagaagttgcctctacaccaccaagctcagaggaggagtccggc
tctgactga
DBGET
integrated database retrieval system
