Pangasianodon hypophthalmus (striped catfish): 113542942
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Entry
113542942 CDS
T05759
Name
(RefSeq) myoferlin-like isoform X1
KO
K22125
myoferlin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113542942
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Others
Ferlins
113542942
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
FerI
FerA
PI3K_C2
Pex24p
Motif
Other DBs
NCBI-GeneID:
113542942
NCBI-ProteinID:
XP_026796603
LinkDB
All DBs
Position
Unknown
AA seq
1863 aa
AA seq
DB search
MLKVVVECAKAIPKKTLGNPDPIAAVVFKGEKKKTKAITSELNPVWNEILEFDLKGSPLD
SSSFIDVVVKDYETIGKDKFIGSAKISLRDLASGQTKSLPSRNVPLVNEKKQDIGATINL
LLGYEPPASAITNPNAQVDGDASAGEAGVSPAGKEEGDEETTDWGDPRAPGEASAPGQPG
KPQKMIRTARKRQKALSNKPQDFQIRIRVIEGRQLPGNNIKPVVKVSVCGQTHRTRIRRG
NNPFFDEIFFYNMNMLPSELFDENIYIRVYNSSSLRSDSLLGEFKLDVGYVYDEPAHAIM
KKWLLLSDPDDSSSGARGYLKVNMIIVGTGEEPPAEKKERNEEQDDIESNLLLPTGVTLR
SATLSLKVYRAEDMPQMDDAFAQTVKNIFGGEGDKKNLVDPFLEVSFAGKKLCTKIIEKN
ANPEWNQLIGLQVKFPSMCERIKLTVFDWDRFTSNDTVGTTYLNLSKISSPGGEVEAGSL
NENGGRPGSDVDRMGTEVGFLPAFGPCYLNLYGSTREFSDLPDPYEELNLGQGEGVAYRG
RVLIELSTRLDDKIDKKVDDLNNDDVLVAQKYQRKRKYSLCAVFHSACMLQEPGEPIQFE
VSIGNYGNKMDSTCKPLASTTQYSCAVFDGNRYYYLPWADTKPVVILTSFWEDISHRLDS
VNVILFIADRLQANITTLKTAMLAKVTETRLAEIWLKLINQLIEDLTNYRLPDIEAKSNL
TALDVQIKTLRDRTFISIRDAACHMREEATDVKATLTDIEDWLDRLQQIAEEPQNSMPDI
IIWMLRGEKRMAYARIPANEVLFSTHSEEATGKYCGKTQTIFMKYPMDKNKGVKIPVQLR
LNMWLGLSAHEKKFNSFAEGTFSVYAEMYENQAQVFGKWGTTGLVGRHKFSDVTGKVKLK
QECFLPPRGWEWEGDWYVDPENCLLTEADAGHTEFTDEVYENESRFPGGEWKPATENYTD
VNGEKAQKPSEIECPPGWKVIQDWSFDSNRAVDEKGWEYGITIPPGDKPSSWVAAEKMYH
VHRRKRLVRLRKKIANAPSLEKKEVGDGWEYSSLIGWKFHRKERSSDTFRRRRWRRKMAP
SDRVGASAIFQLEGALGVDVDEKTSKKEAAKLFGANTPTVSCNFSRSYMYHLRVYVYQAR
NLLPMDKDSFSDPYCHVSFLHVSKTTEIIKANLNPTWDQTLIFNDIEIYGDPQTIAQNPP
SVVLELFDSDQVGKDEAMGRCTCPPVVKLNPSTPVSPKLLWFPITMKGRNAGQMLVAAEL
LLNDKASESELPLVPPRRGENLYMVPQGIRPVVQLTAIEILAWGLRNMKAYQLAAVSSPS
LVVECGGQTVQTAVIKNIKKNPNFPGSVLFLKVLLPKEEMYTPPIVLKVIDHRPFGRKPT
VGQCTIDSLEEYRCDPYMGTSEVSRTARVAMMVATSRDVIIDIEDKIPIVDSKPAEKVDE
AVDWWSKFYASTGEHDKCGPYLQKGYSTLTVYEKELEAIPDFHGLTDFCNTFKLYRGKSD
DGEEDPSVVGEFKGSFRIYPLSDDPDVQTPPRQFRELPESGPQECVVRIYVLRCIDLQPK
DNNGLCDPYLKITLGKKTIEDRDNYKPNTLNPEFGRMFELSCFLPQDKDLKISVYDFDLL
SRDEKVGDTVIDLENRLLSRFNAHCGLSQSYCVSGVNQWRDQLKPSQILENLARLRGLPP
PQIAEDGSSLSFGGRNYNLQDLEASKVLHQHLGPAKERICLHVLRKQGLVSEHVETRTLY
SSFQPTLSQGKVQMWVDIFPKSLGNPGPLIDISPRKAKKYYLRAVIWNTTDVILDETSIT
GEKMSDIYVKGWMPGMEEDKQKTDVHYRSLDGDGNFNWRLVFGFDYLPAEQLCLVSKKVC
TRL
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggtggtggtcgagtgcgctaaagcaatccccaaaaagacactcggcaacccg
gaccccatcgccgcagtcgtctttaaaggtgaaaaaaagaaaaccaaagctatcactagt
gagttaaatcctgtgtggaatgagattcttgagtttgatttaaagggttcgcctctggac
tcttcttcattcatcgatgtggtggttaaagactatgaaaccatcggcaaggacaaattt
attggctctgcaaaaatctctctccgggatttggccagtggtcagaccaagtctctgcct
tcaaggaatgtccctcttgtcaatgagaagaagcaagatataggggcaactataaattta
ctacttggatatgagcctcctgccagtgctattactaacccaaatgcacaagtcgatgga
gatgccagtgctggagaagcaggtgtttctccggctggaaaggaagaaggtgatgaagaa
actacagactggggagatccacgggctccgggagaggcatctgcacccggccagcctgga
aagccccaaaagatgatccgcacagcccggaagagacagaaagctctgtctaacaaaccc
caagatttccagattcgcatccgagtcatcgagggtcggcagttgcccggaaataacatc
aaaccagtggtcaaagtaagtgtttgtggacagacccacaggacaaggatcaggagagga
aacaacccattttttgatgagatcttcttctacaacatgaacatgctgccttcagagctt
ttcgatgagaacatctacattcgggtttataactcatcctccctgagatcggacagtctt
ttgggggagtttaagctggatgttggctatgtctatgatgagcctgctcatgccataatg
aagaagtggctgctgctgagtgatcccgatgactccagctcaggagctcgaggttacctg
aaagtcaacatgatcattgtgggaactggagaggagcctccggcagaaaaaaaagagcgc
aacgaggagcaggatgacattgagagcaacttgctgctgcctactggggtcacactgcgc
tcagcaacactctctctcaaagtgtaccgtgcagaggacatgccacagatggatgatgca
tttgcacagactgtcaagaatatatttggaggagagggtgacaagaaaaaccttgtggat
ccatttttggaagttagttttgcaggcaaaaagctatgcacaaagatcattgagaagaat
gcaaatccagagtggaaccagctgataggcctccaggttaagttcccatcaatgtgtgaa
cgtatcaaacttactgtgtttgactgggatcgcttcacaagcaatgatactgttggaacc
acatacttaaatctgtccaaaatatcatcacctggtggtgaagtagaagctgggtcgctt
aatgagaatggaggccgtccaggatctgatgtagacagaatggggactgaggttggcttt
cttccagcctttggtccctgttacctaaacctttatgggagtacaagggaattctctgac
cttcctgacccatatgaggagctcaatttgggacagggtgagggggtagcctacagaggc
agagttctcattgaactttctactcggctggatgacaagattgacaagaaagtggatgac
ctcaacaacgatgatgtcctagtagcacagaagtaccagcggaagaggaagtactccctg
tgtgcggtgttccacagtgcgtgcatgctgcaggaacctggtgaacccatccagtttgaa
gtcagcatcggcaactatggcaacaagatggattcaacatgcaaacctctggcctccacc
acgcagtacagctgtgctgtgtttgatggaaatcgctactactacttgccttgggctgac
actaagccggttgttatcctcacttccttctgggaggatatcagccatcgtttggattca
gtgaacgttattctctttattgctgatagactgcaagccaacattaccacactgaagacg
gccatgctggctaaagttactgagacacgactagcagagatctggctgaaacttatcaac
caactcattgaagacctcaccaattaccggttgccagacatagaggccaagtctaacctg
acagcactggatgttcaaatcaaaacgctacgagatagaaccttcatcagcattagagat
gccgcctgccacatgagggaggaggctactgatgttaaagccacacttactgacatagag
gattggttagaccgcctacagcagattgcagaggagcctcagaacagcatgcctgatatc
attatttggatgctgagaggagagaagcgtatggcttatgcacgcatcccagccaatgag
gtcctcttctccacccatagcgaagaggctactggaaaatactgtgggaagacacagacc
atcttcatgaagtacccgatggacaaaaataaaggggtgaagattcccgtgcagctgcgt
ttgaacatgtggttgggcctgtcagctcacgagaagaagttcaacagctttgcagaagga
acattcagcgtctatgctgaaatgtatgaaaaccaggcccaagtttttggaaaatgggga
accacaggcctggtgggccgccacaagttctctgacgtgacagggaaggttaagctgaag
caggagtgcttcctgcccccacgtggctgggaatgggagggtgactggtacgtcgaccct
gaaaactgtctgctgacagaggctgacgcagggcacacagagttcacggatgaagtatat
gaaaatgagagtcgtttccctggtggcgagtggaagccagcaaccgaaaactacactgat
gtgaatggagagaaagcccagaaacccagcgagattgaatgtcccccagggtggaaggtg
attcaggactggagctttgacagcaacagagctgtggatgagaaaggttgggagtatggc
atcactattcctccaggtgataaacccagctcctgggtagcagcagaaaaaatgtaccat
gtccatcgcaggaaaagactggtccggctgcgaaagaagattgcaaatgcccccagctta
gagaagaaagaggtgggagatggctgggaatattcctctctgattggttggaagtttcac
aggaaggagcgttcctcagatacgttccggcgcagacgctggaggagaaagatggcccca
tctgaccgtgtgggcgcgtcagccatattccaactagagggggcattgggggtggatgtc
gatgaaaaaactagcaaaaaagaggcagccaagcttttcggtgccaacacacccacagtt
tcctgcaacttcagcaggtcatacatgtaccacctcagagtgtatgtttatcaggcccgg
aaccttcttcccatggacaaggacagcttttcggatccctactgccatgtgtcctttctc
catgttagcaagaccacagagatcattaaagctaacctcaaccccacatgggaccagaca
ctcatctttaatgacattgaaatctatggagacccacagactattgctcaaaatccaccc
agtgttgtcctggagctttttgacagtgaccaagtggggaaggatgaagccatgggcagg
tgcacatgtcccccagtggtaaaactaaaccccagcacaccagtgagcccaaagctgctc
tggttccccatcaccatgaagggtcgaaatgctgggcaaatgctggtggcagccgaactt
ttgctgaatgataaagcatctgagtctgaactgccacttgtgccacccagaagaggagag
aatctgtacatggtgcctcaggggatcaggccggtggtgcagctcactgctattgagatt
ttggcctggggtttgcgtaacatgaaggcatatcagctggccgctgtttcttcccccagt
cttgttgtggaatgtggagggcagactgttcagacggctgtcatcaaaaacatcaagaaa
aacccaaacttccctggatcagttctcttcctcaaagtgcttcttcccaaagaagaaatg
tacactccacccatagtgctgaaagtgatagaccacaggcccttcggcaggaaacctact
gtcggccagtgcactatagactctctggaagagtataggtgtgatccctacatgggcacc
tctgaagtatctaggactgcaagagtggccatgatggtagcaacctctagagatgtgatc
attgacatagaagacaaaataccaatcgtagacagcaagcctgctgaaaaggtggatgaa
gctgtggactggtggagtaaattctatgcctctactggagagcatgacaagtgtggcccg
tatctccaaaaaggttattccactctaacagtttatgaaaaagaacttgaggctatacca
gatttccatggcctgacagacttctgcaacacatttaaactgtacagaggaaagagtgat
gatggtgaagaggatccttctgtagtgggggagtttaagggttctttcagaatatacccc
ttatcagatgacccggatgtccaaactcctcctcggcaattccgagagttgcctgagagc
gggcctcaggaatgcgtggttagaatttacgtgttgcgctgtattgacctgcaacccaaa
gacaacaatggcttgtgcgatccttatttaaagattactcttggaaagaagaccattgag
gacagagataactacaaaccaaacaccttaaaccctgagtttggaagaatgtttgagctg
tcctgtttccttccgcaagacaaagacctgaaaatcagtgtctatgactttgatttgcta
agtcgtgatgaaaaggttggggacacggttattgaccttgaaaatcgcctcctttctcga
tttaatgcacactgtggtctttcccagtcatactgtgtctctggagtgaaccagtggaga
gaccagctgaagccatctcagatcctggaaaacctcgccagactgagaggactcccgcca
ccacagattgcagaagatggcagttcactgtcttttggaggacgtaactacaaccttcag
gacttagaggccagtaaagtgctgcaccagcacctgggtccagccaaagagcgcatatgc
ctgcatgtactgcgcaaacagggcctggtgtctgagcatgtagaaaccaggacactctat
agctccttccagcccactctctctcaggggaaagttcagatgtgggtggatatattcccc
aaaagccttggcaatcctggacccctaattgatatcagtcctcgtaaagctaaaaagtac
tacctacgggctgtcatttggaataccactgatgtcattctggatgaaaccagcattact
ggggaaaagatgagcgatatctatgtgaaggggtggatgccaggtatggaggaggacaaa
cagaaaactgatgtccactacaggtcactagatggagatggaaatttcaactggagacta
gtctttggctttgactacctaccagcggagcagctgtgtcttgtgtcaaaaaaagtgtgt
acacgtctttaa
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integrated database retrieval system
