Pangasianodon hypophthalmus (striped catfish): 113542962
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Entry
113542962 CDS
T05759
Name
(RefSeq) polycomb complex protein BMI-1-B-like
KO
K11459
polycomb group RING finger protein 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113542962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
phyp03036
]
113542962
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
113542962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
Prok-RING_4
zf-C3HC4_4
zf-ANAPC11
zf-Nse
Motif
Other DBs
NCBI-GeneID:
113542962
NCBI-ProteinID:
XP_026796624
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MTMHRTTRIKITELNPHLMCVLCGGYFIDATTIVECLHSFCKMCIVRYLETSKYCPICDV
QVHKTKPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYAAHPSVDAAKGSNEDRGEVA
DEDKRIIADDEIISLSIEFFDQNRFGSGDGEDKEPTKESNVKRYLQCPAAMTVMHLRKFL
RSKMDIPCNFQIEVMYEDEPLKDYYTLMDIAYIYTWRRNGPLPLKYRVRPGCKKLKLSSA
PSCETAGQKPETESDSGSEKLSSPVLHAPTPSTSSSLPSQSAPVKSSHSSFSHLSPVNGV
SNKAGPNGQVSFSNKASKGSVNGSNSLG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaccgaaccacgcggataaagatcacggagctgaacccgcatctgatgtgc
gtgttatgcggcggctactttatcgacgccactaccatcgttgagtgtcttcattcgttc
tgtaaaatgtgcatcgtgcggtatttagagaccagtaaatactgtcccatatgtgacgta
caagttcacaaaaccaaaccacttctcaatatcaggtcggataaaacccttcaggacatt
gtgtacaagctggtgcctggtctgttcaaaaatgaaatgaaacgaagaagagatttttat
gcagcacatccatccgttgatgccgctaaaggatcgaatgaggatcggggagaagtggct
gacgaggacaagagaatcattgctgatgatgagatcattagtctctcgattgagtttttt
gatcagaacagatttggaagtggtgatggggaagacaaagaacccacaaaagagtcgaat
gtaaagcgatatttgcaatgcccggctgctatgacagtgatgcatctcagaaaatttctc
cgaagtaaaatggatattccatgtaacttccagattgaggtcatgtatgaagacgagcct
ctgaaggattattacacattaatggacattgcctatatctacacctggaggcggaatggt
ccactgcctctgaagtacagggttcgtcctggctgtaagaagctaaagctaagcagcgca
ccaagctgtgagacagcaggtcaaaaacctgaaacggaaagtgactcgggaagcgaaaag
ctcagcagcccagtccttcatgctcctacaccttccacatcctcctctctgcctagccag
agcgctccggtcaaatcctcacactcaagcttctctcatctctcaccagtcaacggagtg
tccaacaaagccggccccaatggccaagtctcattcagcaacaaagccagcaagggctca
gtcaatggctccaactctctggggtga
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