Pangasianodon hypophthalmus (striped catfish): 113542977
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Entry
113542977 CDS
T05759
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113542977 (trim59)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113542977 (trim59)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_10
zf-C4H2
Sdh_cyt
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
113542977
NCBI-ProteinID:
XP_026796642
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MENLEEDLTCSVCYSLFNDPRVLPCSHTFCKACLDNVLQVSTNFSIWRPLRLPLKCPNCR
SMVELPPNGVEGLPINVCLRAIIEKYQRDSEPRTPSCPEHHRQPLNVYCVQDCKLICGLC
LTIGQHQGHTIDDLQTAYVKERNTPARLVERLTDRRWEEVCGLVEKLEQEKSRHEGLIRQ
DREAVTRFFQGLERLLEHKKEAFMKVLDRANGQLVCTYKPLIEKLKDMKEEQLELISIIS
SISEDESALVFLEKVHHLRQRVDALTQTELPEVPTLHISPHLEEFLEEHWANVTIGRLED
SPVPEISCHVKRHTTEEPQSALAQKWTFKSLTAVALLMVLLFLLVFWLNPVIGASLGFSS
VSQISQAVVSLAHELSLPLHGSGTFLYCLLHDLSLKFNSYISAVGESTYQHVAFFFKTLR
LC
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggagaatttggaagaggatttgacgtgctctgtttgttattccctctttaacgatcca
cgagtactaccctgctcccacaccttctgcaaagcatgtctggacaacgtgctccaggtc
tccactaacttctccatctggcgcccacttcgcctaccactcaagtgtcccaactgccgt
agcatggtggaacttccgcctaatggcgtggaaggtctgccgattaatgtctgtctgcgc
gccattatagaaaagtaccagcgtgacagtgagccgcgaactccttcctgccctgagcac
catcgccagcctctgaatgtctactgcgttcaggactgcaagcttatatgtggtttgtgc
ctcactattgggcagcatcagggccacaccattgatgatctgcagacagcgtacgtcaaa
gagcgcaataccccagccagactagtcgagcggctcacggacaggcgctgggaagaagtc
tgtggcctggtggagaagttagaacaggaaaaatctcgacatgaaggtctaataaggcaa
gaccgcgaagccgttacgcggttctttcagggcctggagcgccttctggagcacaagaaa
gaggcattcatgaaagttctggacagggccaacgggcagctggtctgcacttataagcca
ctcatcgagaagcttaaggatatgaaggaggagcagctagagctcatctccatcatctca
agcatcagtgaagatgagtcagcccttgttttcctggaaaaggtgcaccacttgaggcag
agggttgatgccttgacccagacagagctgcctgaagtccccaccctccacatctcgcct
cacttagaggagttccttgaggaacactgggctaacgtgacgattggaaggctggaagat
agtccagttccagaaatctcctgtcatgtgaagagacatactactgaagagccacagtca
gcattagctcagaagtggacgttcaagtctttgactgctgtggctttgctgatggtgctg
ctgttccttctggttttctggttaaatccagtgattggagcatcacttgggttctccagc
gtctcacagattagtcaagcagtagtgagtctagctcatgaactttctttaccacttcat
ggctcagggacgtttctatactgcctgcttcatgatcttagccttaaattcaattcgtat
atttcagctgtaggagagagcacctatcaacatgtggccttcttttttaaaacattacgg
ttatgttaa
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