Pangasianodon hypophthalmus (striped catfish): 113543030
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Entry
113543030 CDS
T05759
Symbol
rnf180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113543030 (rnf180)
Enzymes [BR:
phyp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113543030 (rnf180)
Ubiquitin system [BR:
phyp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113543030 (rnf180)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
Csc2
NuBaID_C
Motif
Other DBs
NCBI-GeneID:
113543030
NCBI-ProteinID:
XP_026796756
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MASFDTDGVSDPVGIHEEPSVLRCKKCRRCVVDSSCLLSASEDLMAGCTVWHVDVDALPD
WILSVINQVHWTTGKLNCQHCGARLGGFNFLNCSRCPCGHDTTVHLIKSRVDQVVKHLVY
LSKPGTARVHTGFQVKHKDLEGPEDRNLGCDLHPVTHGLNPEPELQSREIQATHFDGEPS
VISPFSRPLSLPLLHPVHEEMNEAAAHDDSHTHLTPTELSDHLQNQDSHLDSFPSPTQDT
VMGQADISDGVTEETQDHAYFTPVQMLTKREKNRLKSLRRKQRKKERWIQRQLEEKSVSW
NLTSSDEEEKEGCMCAVCLDVYYKPYMCQPCSHVFCEPCLRTLAKSRASSTPCPLCRTLI
SHVIFQEELHQHTRTHFPKEYRMRNETFHKTNYSKWPLPSCPKHFHFLWGLQRHRASAGQ
WQFPLRALGLNRLELGDIRGWTFHSDMITFIFSFHWVLSSFIILCGLFYILLW
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctttgatacggacggagtatcagaccctgttggaatccacgaggaaccgtca
gtccttcgctgtaaaaagtgccgaagatgtgttgtagattcatcatgcttgctttcagcc
tcagaagacctcatggctggatgcacagtgtggcatgtggatgttgatgcattgcctgat
tggatcctgtcagttattaatcaggtccattggacgacagggaaactgaactgccagcac
tgtggagcacgtctcggtggtttcaactttctaaactgttcacgatgtccctgtggacac
gacacgaccgtgcacctcattaaaagccgtgttgatcaggtcgtaaagcatctggtctac
ttgagcaaaccaggtacagctagagtacacacagggtttcaggttaaacacaaagatcta
gaaggaccagaggacagaaacctgggctgtgacctacatccggtcactcatggactaaac
ccagagcctgagctccagagcagagaaatacaagcaactcatttcgatggtgagccatct
gtcatctctccattcagtcgtccgctttctttgcctctccttcatcctgtacatgaggaa
atgaacgaggcagcggctcatgatgacagccacacacacctgacaccaacagagctatca
gatcatctgcagaaccaggacagtcatcttgattcctttccatcacctactcaggacacg
gtcatgggacaagcggatatcagtgatggtgttacagaggaaacacaggaccatgcctac
ttcactcctgtgcagatgttgaccaaaagagagaagaatcgcttaaagagcctgaggaga
aagcagagaaagaaagaacgctggattcagagacagcttgaggagaagagtgtgagctgg
aatctgacgagcagcgatgaagaggagaaagagggctgcatgtgtgccgtttgtctggac
gtgtactacaagccgtacatgtgtcagccctgcagccatgtgttctgtgagccctgtctg
aggacgctggcaaagagccgggccagcagcacaccatgtcctctctgcagaactctcata
tcacatgtgatcttccaggaagagcttcaccaacacactaggacccacttccccaaagaa
taccgcatgagaaatgagactttccataagaccaactattccaaatggcccctgcccagc
tgtccgaagcattttcactttttatggggtctgcagagacacagagcttcggctggtcag
tggcagttccctctcagagcgttgggactgaacagactggaactgggagacataaggggc
tggacttttcactctgatatgatcaccttcatcttctctttccactgggtgctttcctct
tttatcattttgtgtggccttttctacatcctcctctggtga
DBGET
integrated database retrieval system
