Pangasianodon hypophthalmus (striped catfish): 113543033
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Entry
113543033 CDS
T05759
Name
(RefSeq) tiggy-winkle hedgehog protein-like
KO
K11988
sonic hedgehog
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
113543033
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113543033
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
phyp00536
]
113543033
Peptidases and inhibitors [BR:
phyp01002
]
Cysteine peptidases
Family C46: hedgehog family
113543033
Glycosaminoglycan binding proteins [BR:
phyp00536
]
Heparan sulfate / Heparin
Morphogens
113543033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Motif
Other DBs
NCBI-GeneID:
113543033
NCBI-ProteinID:
XP_026796766
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MDLTLLLRKLALVSSVCVLLAGCARACGPGRGYGKRRHPKRLTPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKELTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEAWDEDGNHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSALVYLSDGSTKHVEDLKEGDRVLAADELGNIVYSD
FIAFLDRDVNMHRTFLVLETSERNVTLRLTAAHLVFVRDDSAASGMAAKFASGVKPGQEV
FVWEGRGRLRSARVERVYAVEDRGSYAPLTAHGTIVVDGVLASCYAAVEEHRWAHWAFAP
LRLSHTLTATSWWRWIVPDSNVTSQQDGIHWYPKMLLHVGMWLLDRDAFHPLGISGSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggacctgacgctgctgctccggaagctggcgctcgtctcgtccgtgtgcgtgctgctg
gccggttgcgcgcgcgcctgcggtccgggccgcggctacgggaagcgcagacacccgaag
agactgacgccgctcgcctacaagcagttcatccccaacgtggcggagaagacgctgggc
gcgagcgggaagtacgagggcaaaattacgcgcaactcggagcgcttcaaggagctcaca
cccaactacaaccccgacatcatcttcaaggacgaggagaacaccaacgcagaccgactc
atgacccagcgatgtaaagacaagctgaattcgctggccatctcggtgatgaaccagtgg
cccggggtgaagctgcgtgtaacagaggcctgggacgaggacggcaaccattttgaagag
tctttacactacgagggccgagcggtggacatcacgacctcggacagagacaagagcaag
tacgggatgctgtcgagactcgccgtggaggccggattcgactgggtttattacgaatcc
aaagcgcacatacactgctccgtcaaagcagaaaattccgtcgctgctaaatccggcggc
tgctttcccggatctgcgttggtttacctctcagatggaagcacgaagcacgtggaggat
ctgaaggaaggtgatagggttcttgcagcagatgagctgggaaacatcgtgtacagcgac
ttcatcgccttcctggaccgagatgtgaacatgcaccggacattcctcgtacttgagacg
tcggagcgtaacgtgactctgaggctcacggcggcgcacctggtcttcgtccgggacgat
tcggctgcctcggggatggcggcgaagtttgcgagcggcgtgaaaccaggacaggaagtg
tttgtgtgggaggggcggggacgtctgaggagtgcacgtgtagagcgtgtttacgcggtg
gaggacaggggctcgtacgcgccgctcaccgcacacgggaccatcgtggtggacggtgtg
ctagcttcgtgctacgctgccgtggaggagcaccgctgggcgcactgggcttttgcgccg
ctccgcctgagtcacacgctcacggcgacctcatggtggcgctggattgtaccggattca
aacgttacttcgcagcaggacgggattcactggtatcccaagatgctgctgcacgtcgga
atgtggctgctggaccgggacgctttccacccgctcgggatttcaggctcgagctga
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