Pangasianodon hypophthalmus (striped catfish): 113543061
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Entry
113543061 CDS
T05759
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04210
Apoptosis
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
113543061 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113543061 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113543061 (sptan1)
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
113543061 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
113543061 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Spectrin_3
Motif
Other DBs
NCBI-GeneID:
113543061
NCBI-ProteinID:
XP_026796834
LinkDB
All DBs
Position
Unknown
AA seq
2496 aa
AA seq
DB search
MDTGGTKVLETADDIQERRQQVLDRYRRFKELSAVRRQKLDDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANSGAIIKLDETGNLMISESHFSSETI
RSRLEELHRLWDLLLQKTKEKGVRLLQAQKLVQYLRECEDALDWITDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQAAAKLTQESHPETELILKKQEEVNAAWQRL
KGLAQQRQGKLFGSAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGEAERLQQTYPQNASQIHLKRDELITNWEQIRTLAAERHAHLNDS
YRLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKAT
TEAGEALLNTGHYASEEVKEKLGILAEEKESLLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHDRAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELIDGKHYASAEVATRMDEVSSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEMEGHLASDDYGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVARYEALKEPMAARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIASSTNRGKDLIGVQNLLKKHQALQAEITGHEPRI
KAVTQKGEAMVDEGHFAGEDVKAKLAELHGRWEALKGKAAQRKQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQSLKEQAQACRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDEQGSIALRQEQIENQNVATKEACSVSVRMKQVEELYGTLLELG
EKRKNMLEKSCKKFMLFREANELQQWINEKEGALTNEEVGSDLEQVEVLQKKFDDFQKDL
KANESRLRDINKVASELESEGLMAEEAPMVQAQQQELLGSAPGKEETDSKTASPWKSIRM
AVQTTANFNTIKELNNRWRALQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALN
TDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTEL
NTAWSSLVGRADQRKDKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEAL
LERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDRERADLEKAWVQR
RMMLDQCLELQLFNRDCEQAENWMAAREAFLATDDKGDSLDSVEALIKKHEDFDKAINVQ
EEKIAALQSFADQLISADHYAKPEIFKRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFS
RDVDEIEAWISEKLQTATDESYKDPTNIQSKHQKHQAFEAELHANADRIRGVIDTGNALI
QRGACAGSEDAVKSRLVALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEV
EALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMASNAFDTSQVKD
KRDAVNGRFAKIKSMAAGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYGRDLT
GVQNLRKKHKRLEAELGAHEPAIQSVLDTGKKLSDDNTIGQDEIQQRLAQFVEHWKELKD
LAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHEAFET
DFTVHRDRVNDVCANGDELIKKENHHVDNITAKMKSLRGKVAELERAAAQRKAKLDENSA
FLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGITNIT
ALKDQLLAAKHVQSKAIEARHATLMKRWNQLLSNSAARKKKLLEAQEHFRKVEDLFLTFA
KKASAFNSWFENAEEDLTDPVRCNSLEEIRALREAHDAFRSSLSSAEADFNQLAELDRQI
KSYHMVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAF
HQWLQETRTYLLDGIAYRRVIRVYQYEVDDDLSGRSCMVEESGTLESQLEATKRKHQEIR
AMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARN
TTGVTEEALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFESILD
TVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAFRALSAENKPYVTKEELYQNLTKE
QADYCISHMKPYLDSKGRELPSAFDFVEFTRSLFVN
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atggataccggcggcacgaaagttcttgagacagccgatgacatccaggagcgtcggcag
caggtcctggaccgttaccggcgctttaaggagctgtcagccgtgcgcagacagaaactg
gacgactcataccgcttccagttctttcgccgtgacgcagacgagctagagaaatggatc
caggagaagctgcagatcgcttctgatgagaactacaaggaccccagcaaccttcaggga
aagctccagaaacaccaggcctttgaagcggaggtgcaggccaactctggcgccatcatc
aaactggacgaaactggcaacctcatgatctccgagagccacttctcctccgagaccatc
cggagtcgcttagaggagctgcaccggctgtgggatctgctgctgcagaaaactaaggag
aaaggtgtgcgtctgctgcaggcccagaaactggtgcagtacctgagggagtgtgaggat
gccctggactggatcactgacaaggaagccattgtcacctctgaggagttgggtcaggac
ctggagcatgtggaggtcctgcagaagaagtttgaggaattccagacagacctggcagcc
cacgaggagcgcgtgaacgaagtgaaccaggccgcagctaagctaactcaggagagccac
ccagagaccgagctgatcctgaagaagcaggaggaggtgaacgcagcatggcagaggctg
aagggtcttgctcagcagagacagggcaaactgttcgggtctgccgaggtgcagcgtttc
aaccgggatgtggatgaaaccatcagctggatcaaagagaaagagcagctcatggcctct
gacgatttcggacgtgacctggccagtgttcaggctctgctgcgcaaacatgaggggctc
gagagggacctggctgccctggaggataaggtgaacactctgggtggtgaagcggagcgt
ctgcagcagacttacccccagaacgcctctcagatccacctcaagagagacgagctcatt
accaactgggagcagatacgcacactggctgctgagcgccacgcccatctcaacgactcc
tacaggcttcagcgtttcaccgcagatttccgtgacctcaccagctgggtgaccgagatg
aaggctctgatcaacgctgacgaactggccaacgacgtcgccggggccgaagctctgctc
gaccgacaccaggaacacaagggagagatcgatgcccatgaggacagctttaaggccaca
actgaggcaggagaggctctcctgaacactggacactacgcatcagaggaggtcaaggag
aagctgggtattctggctgaggagaaggagtctctgctggagctgtgggagctgcgcaga
cagcagtatgaacagtgcatggacctgcagctcttctacagggacactgagcaggtcgac
aactggatgagcaagcaggaggctttcctcctgaatgaggacctgggtgactctctggac
agcgtggaagccctgctgaagaaacatgaagactttgagaaatcgctcagtgcccaagag
gagaagatcactgccctggatgaatttgccaccaagctgatccagaacaatcactacgcc
aaggaggacgtggccactcgcagagacgcattgttgagcagacgtaatgctctgcacgat
cgtgctcagtcccgccgtgccgcccttgaggactctttccacctgcagcagtttttccgt
gactctgatgagctcaagagctggatcaatgagaagatgaagaccgccacagacgaggcc
tacaaggacccctccaacctgcagggaaaagtgcagaagcaccaagccttcgaggcagag
ctctctgccaatcagagccgtatcgatgctctgcagaagtcgggtcaggagctgatcgat
gggaaacactatgcctctgctgaggtggccactcgcatggacgaggtcagctcccagtgg
aagaaacttttggaagccaccgagctcaaaggcattaagctgcgtgaagccaaccagcag
cagcagtttaatcgtaacgtggaggacatcgagctgtggctctatgaaatggagggtcac
ctggcctccgatgactatggcaaagacctgaccagtgttcagaacctgcagaagaagcat
gccttgctggaggctgatgtggctgcacaccaggaccgcattgatggtatcaccatccag
gcccggcagttccaggaagctggccactttgatgccgataacatccggaagaaacaggag
gcgctggtagcacgctacgaggctctgaaagagcccatggccgcacgaaaacagaagctg
tcggactctctgcggctgcagcagctgttccgtgacgtggaggatgaggagacgtggatt
agagagaaggaacccatcgcttcctctaccaacaggggtaaagacctgattggtgtgcag
aacttgctgaagaagcaccaggccctgcaggcggagatcaccgggcacgagccccgcatc
aaggctgttactcaaaagggcgaagccatggtggatgaggggcactttgccggtgaggat
gtgaaggccaagctggcggagctgcacgggcgctgggaggctctgaaagggaaggcagct
cagcgcaagcaggatctggaggactccttgcaggcccagcagtacttcgctgatgccaac
gaggctgagtcctggatgagggagaaggagcccattgtaggcagcactgactacggcaaa
gacgaggactcagctgaggccctgctgaagaaacatgaggcactgatgtcagacctgagt
gcttatggaagcagcatccagtccctgaaggaacaggctcaggcctgcaggcaacaagtt
gctcctactgatgatgagaccggtaaggaattggtgctcgccctctatgactaccaggag
aaaagtcctcgtgaagtcaccatgaagaaaggagacatcctcaccctgctcaacagcacc
aataaggattggtggaaagtggaggtgaacgacaggcagggctttgtgccggcagcatac
gttaaaaagctggacccgactcagtcgtcctcccgcgagaacctgctggatgagcagggc
agcatcgcactacgccaggagcagatcgaaaaccagaatgtggccaccaaggaagcgtgc
agtgtgtctgtgcgcatgaagcaggtggaggaactgtatggcaccctgctggaactgggc
gagaagaggaagaacatgctagagaagagctgcaagaagtttatgctgttccgtgaggcc
aacgagctgcagcagtggatcaacgagaaggagggagcattgaccaacgaggaggtgggg
tctgacctcgaacaggtggaggtgctgcagaagaagtttgacgatttccagaaggatctg
aaggcaaacgagtctcgtctgagggacatcaacaaggtggcatcagagctggagtctgag
ggactgatggctgaggaggctccaatggtgcaggctcagcaacaagaactgttgggctcg
gctcctggcaaggaagaaactgattccaaaaccgcctctccctggaagtctattcgcatg
gctgtccaaacgacggctaactttaatactattaaggagctgaataaccgctggagagcg
ctgcagcagctggcggaggacaggagtaacatgctgggaagcgcccacgaggtgcagagg
ttccacagggatgctgatgagaccaaagaatggattgaggagaagaaccaggccctaaac
accgacaactatggtcacgacctggctagcgttcaggccctgcagcgcaaacacgagggc
ttcgagagagacctggctgctctgggagacaaggtgaactctctgggtgagacagccgag
cgtctgatccagtcccatcctgaggctgtggatgatattcaggagaaatgcactgagctg
aacacggcctggagcagcctggtgggacgtgccgaccagcgcaaggacaaactgggcaac
tcgcacgacctgcagcgcttcctcagtgacttccgggatctgatgtcctggatcaatggt
atccgtggacttgtgtcttctgatgagcttgccaaggacgtgactggagctgaagcactg
ctggagagacaccaggagcacaggactgagatcgatgcccgtgctggaaccttccaggcc
tttgagcagtttgggcagcagctgctggcacgtggtcactacgccagtcctgagatccag
cagaaactggaggctttggaccgcgagagggcggacctggagaaggcctgggtgcagcgc
aggatgatgctggatcagtgcctggagctgcagctgtttaaccgtgactgtgagcaggct
gagaactggatggcagcgagagaagctttcctggccactgacgacaagggcgactccctc
gacagtgtggaggccctcatcaagaagcacgaggacttcgacaaagccatcaatgtgcag
gaggagaaaatcgccgcactgcagtccttcgctgaccagctcatttctgctgaccattac
gccaaacctgagatcttcaaacgccgcaacgaagtcttggacaggtggcgccgcctgaag
gctcagatgattgagaaacgctccaagctgggtgagtctcagactctgcagcagttcagc
agagacgtggatgagattgaagcctggatcagtgagaaactgcagacggccactgatgag
tcctacaaagacccaactaacatccagagtaagcaccagaaacaccaggcgttcgaggca
gagcttcatgccaatgctgaccgtatccggggtgtgatcgatacaggaaatgctctcatc
cagaggggtgcatgtgcaggaagtgaggatgccgtcaagtctcgtctggtggctctggat
gaacagtggcagttcctggtgaataaatcagctgagaaaagtcagaagctgaaggaggcc
aacaagcagcagaacttcaacaccggcataaaggacttcgatttctggctgtcggaggtt
gaagctcttctcgcctctgaggattatgggaaggatctggcctcagtcaacaacctgctg
aagaagcaccagcttctggaggctgacatctctgcccatgaagatcgtctgaaggacctc
aatggccaggctgacagcctgatggccagcaacgcctttgacacctctcaggtcaaagat
aagcgtgatgccgttaacggacgctttgctaaaatcaagagcatggccgctggacgccga
gccaagctgaatgagtcgcaccgcctgcaccagttcttcagagacctggacgatgaagaa
tcttggatcaaagagaagaagttgttggtgagttcggaggattatggacgtgatttgaca
ggagtacagaatctgaggaagaagcacaagagactggaggctgagcttggagctcacgag
ccggccattcagtctgtgctcgacacggggaagaagctgtctgatgacaacaccatcggg
caggacgagatccagcagaggctggcgcagtttgtcgagcactggaaggagctgaaggat
ctggccgctgccagggggcagaggctggaggaatcgctggagtatcagcagtttgtggcc
aatgtagaggaagaagaagcctggattaatgagaagctgaacctggttggaagtgaagac
tatggtgacacgctggcggctgtgcagggcttgctgaagaagcatgaggcgtttgagaca
gacttcactgtgcacagggaccgagtgaacgatgtgtgcgctaacggagacgaactcatc
aagaaggagaaccaccacgtggacaacatcacggccaagatgaagtccctgcgtggcaaa
gtggccgagctggagagagccgccgctcagaggaaggccaagctggacgagaactccgcc
ttcctacagtttaactggaaggctgatgtggtggagtcatggatcggtgagaaagagaac
agtctgaagacagatgattatggacgagacctgtcatcagtgcagacgctgctcactaag
caggaaacattcgatgctggacttcaggcattccagcaggagggcatcaccaacatcact
gcgctgaaggatcagctcctcgcagccaaacacgtgcagtccaaagccattgaggctcgt
cacgctacactgatgaaacgctggaaccagctgctgtccaactccgcagcccgcaagaag
aagctgctggaagctcaggaacacttcagaaaggtggaggatctgttcctgacctttgct
aagaaagcatcagcctttaacagctggtttgagaatgccgaggaggatctgaccgaccca
gtgagatgtaactctctggaggagatcagggctctgcgtgaggcccacgatgcattccgc
tcttccctgagctccgctgaggccgacttcaaccagctggccgagctcgaccgccagatc
aagagctaccacatggtgtctaacccctacacctggttcaccatggaggctctggaggag
acctggaggaacctgcagaagatcatcaaggagcgtgagctggagctgcagaaggagcag
agaaggcaggaggagaatgacaagctgagacaggagtttgctcaacacgctaacgctttc
caccagtggctacaggagaccaggacatatcttctggatggcatagcctatcgtcgggtt
atccgagtctatcagtatgaagtcgatgatgatctttctggaaggtcctgtatggtggaa
gagtctggaactctggagtcacagctggaggccacgaagcgtaagcaccaagagatccgt
gctatgcgcagccagctgaagaagattgaggatctgggtgcggccatggaggaggcactg
atcctggacaacaagtacacggagcacagcacggtaggactggcgcagcagtgggatcag
ctcgaccagctcggtatgaggatgcagcacaacctggagcagcagatccaagccagaaac
acaacaggagtcacagaggaagccctcaaggagttcagcatgatgttcaaacatttcgac
aaagagaaatccggtcgcctgaatcaccaggagttcaagtcctgcctgcgctcactgggc
tacgacctgcccatggtggaggaaggagaaccagacccggagtttgagtccatcctggac
acggtggaccccaacagggacggcaacgtgtccttgcaggagtacatggccttcatgatc
agccgcgagacagagaacgtcaagtctagtgaggagatcgagagtgctttccgagctctc
agtgccgagaacaaaccatacgtcaccaaggaggagctctaccagaatctaaccaaggag
caggctgattactgcatctcacacatgaagccatatttagacagtaaaggtcgcgagctc
ccgtctgccttcgactttgtggagttcacacgctcgctcttcgtcaactga
DBGET
integrated database retrieval system
