KEGG   Pangasianodon hypophthalmus (striped catfish): 113543105
Entry
113543105         CDS       T05759                                 
Name
(RefSeq) integrin beta-1-like isoform X1
  KO
K05719  integrin beta 1
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03271  Virion - Rotavirus
phyp04145  Phagocytosis
phyp04510  Focal adhesion
phyp04512  ECM-receptor interaction
phyp04514  Cell adhesion molecule (CAM) interaction
phyp04517  IgSF CAM signaling
phyp04518  Integrin signaling
phyp04530  Tight junction
phyp04810  Regulation of actin cytoskeleton
phyp04820  Cytoskeleton in muscle cells
phyp05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    113543105
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113543105
   04514 Cell adhesion molecule (CAM) interaction
    113543105
   04517 IgSF CAM signaling
    113543105
   04518 Integrin signaling
    113543105
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    113543105
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113543105
   04530 Tight junction
    113543105
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    113543105
   04810 Regulation of actin cytoskeleton
    113543105
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    113543105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113543105
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113543105
   04515 Cell adhesion molecules [BR:phyp04515]
    113543105
   04090 CD molecules [BR:phyp04090]
    113543105
Membrane trafficking [BR:phyp04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    113543105
Exosome [BR:phyp04147]
 Exosomal proteins
  Proteins found in most exosomes
   113543105
Cell adhesion molecules [BR:phyp04515]
 Integrins
  Integrin beta subunits
   113543105
CD molecules [BR:phyp04090]
 Proteins
  113543105
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 113543105
NCBI-ProteinID: XP_026796949
LinkDB
Position
Unknown
AA seq 802 aa
MKVKVALIAVLLGFFSFCSAQLDGNDCTKASAQSCGECIQVGEKCGWCTYEAFLKQGESK
STRCDETEALIKKGCPQNNVENPRGAVHVNENKTVTNREKDVAEKLKPDQITQIQPQKLT
LSLRAGEPQKFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTDLMREMQSVTSDF
RIGFGSFVEKTVMPYISTTPAKLLNPCTSDQNCTSPFSYKNVLSLTEDGHQFNSLVSRQQ
ISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGK
CHLKDNMYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIKLIIDAYNSLSSEVILENSKLPEGVSISYVSHCKNGVSETGDNGRKCSNISI
GDEVTFDIAITTKGCPSHGTSEVIKIKPLGFNEEVVIVLNFICECECSKEGIPKSPDCHF
GNGTLECGACRCNEGRIGRVCECSKDDVRAEDLDANCRMDNGTDICSNNGDCICGTCECK
KRDNPEERYEGKYCECDNFNCDRSNNKLCGGHGQCVCRVCVCDANYTGSACDCPLDKQPC
VASNGQICNGRGTCDCGLCKCTDPKFQGPTCEICPTCPGVCTEHKPCVQCRAFKTGEMKD
KCEEKCNYFKLTMVKEKEDLPQPSSQPYLSHCKERDANDCWFFFTYATKNDSVEVYVVEK
LECPTGPDIIPIVAGLVAGIVLIGLALLFIWKLLMIIHDRREFAKFEKEKMNAKWDAQDN
PIYRSPINKFHNPSYGCKSGAL
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgaaggtgaaggtggcattgatagctgttcttctggggtttttctccttctgttcagct
caactagatggtaatgattgcactaaggcttcagctcagtcttgtggtgaatgtatacag
gttggagaaaagtgtggctggtgcacctatgaagcctttctgaagcaaggcgaatccaaa
tcaacacgctgtgatgaaactgaggctctgattaagaagggttgtcctcagaacaatgtg
gaaaatcctcgaggagcagtccatgtcaacgagaacaaaactgtcacaaaccgtgaaaaa
gatgtggctgagaaactgaaaccggaccagataacacagattcaacctcagaagctcaca
ctgagcctaagagcaggcgagcctcagaaattttccctgaagtttaaaagagcagaggat
tatcccattgacctgtattacttgatggacttgagttactccatgaaagatgatttggag
aatgtgaagaatttgggaacggacctgatgcgtgagatgcagtcagtaacgtctgacttc
aggattggttttggttcgtttgtggaaaagaccgtgatgccctacatcagtacaacccct
gctaagcttctgaatccctgcacttctgatcagaactgtacaagccccttcagctataaa
aatgtacttagtctgactgaggatggccatcaatttaacagcctagtcagccggcaacaa
atttctggaaacctggactcacccgagggaggctttgacgccatcatgcaagttgctgtc
tgtggggaacagattggttggaggaatgtcactcgactactagtgttttccactgatgct
ggctttcacttcgcgggagatggtaaactgggtggcattgtgcttcccaatgatggaaaa
tgccacctgaaggataatatgtacacaatgagccattactatgactacccttcaattgca
caccttgtacagaaactgagcgacaacaacattcagaccatctttgctgtgactgaggag
ttccagcctgtctataaggagcttaaaaatctcattccaaagtcagctgtgggaacattg
tctgcgaactccagtaacgtgatcaaacttatcattgatgcctacaattctctgtcgtct
gaggtgatcctggagaacagcaagctgcctgagggagtgtccatctcatacgtgtcccac
tgcaagaacggagtgagtgaaacaggagacaatggaaggaagtgctcaaacatctccatt
ggtgatgaggtgacctttgacatagccatcaccactaagggctgcccatcacatggtaca
tccgaggtgataaagatcaagccactgggcttcaatgaggaggtagtgattgttctaaac
ttcatctgtgagtgtgaatgttccaaagaaggaatccccaaaagtccagactgtcacttt
ggaaatggaacccttgagtgtggagcatgcagatgcaatgagggacgtattggaagggtt
tgtgaatgtagcaaagatgatgtcagggcagaggatctggatgcaaactgccgcatggac
aatggcacagatatctgtagcaacaacggagactgtatctgtggaacatgtgaatgcaag
aagcgagacaacccagaagagcggtatgaaggcaagtactgcgaatgtgacaacttcaac
tgcgaccgatcgaacaacaaactatgcggaggtcatggtcagtgtgtatgcagagtgtgt
gtgtgtgatgcaaactacacaggcagtgcatgtgactgtcccctggacaagcagccctgt
gtagccagtaatgggcagatctgtaatggtcgtggcacctgcgactgtggactgtgtaaa
tgcaccgacccgaagttccaaggtcccacctgtgagatttgccccacttgtcctggagtc
tgcacagagcacaaaccctgtgttcagtgccgtgcatttaagactggagagatgaaagat
aaatgtgaagagaaatgcaactactttaaactaaccatggtgaaagaaaaggaggatctt
cctcagccaagcagccagccctacctcagtcactgcaaagagcgtgatgccaatgactgc
tggttcttcttcacttatgccaccaagaatgacagtgttgaggtctatgtggtcgagaag
ttggaatgccctactggtcctgacattatcccaatcgtagcgggtttggttgcaggcatc
gttttgattggtctggccctgcttttcatctggaagctgctcatgattattcatgaccgc
agagagttcgcaaagtttgagaaagagaagatgaatgccaagtgggatgcgcaagataat
cccatttataggagtcctattaacaagttccacaatccgagttatggatgcaaaagtggg
gcgctctaa

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