Pangasianodon hypophthalmus (striped catfish): 113543112
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Entry
113543112 CDS
T05759
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113543112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113543112
Membrane trafficking [BR:
phyp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113543112
Protein recycling
Other Rab GTPase associated proteins
113543112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
113543112
NCBI-ProteinID:
XP_026796961
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSSRTEHRGIYVDQAALLCSKGCDFYGNSTWGGLCSKCWREENQKARAKQIEEDHALAER
LQREEEAACAGSNQGAHSGNSSTRLSKPEEKRNSQKSRTVPTGKKFFTTLAKTTLGRDVN
VPSQPAPTTSISQQPVADSDQATRQFIDFLKTLQKPGRDIFKQCHSFCYSVSYKKDLGAE
DLSESVQDFYQNLSDRLHNVYKGSPERVEAIMDEVERYITLQLYEQAFCPESADDEVKDL
AIQKRIRALHWVTVQMLCAPLKEEIPAVSDSLDKAITDIIEMDSKRVPKDKLSYVTRCSK
HIFSAIKRSKREAASADDFLPALIYVVLRANPPRLQSNIQYITRFCNPRRLMSGEDGYYF
TNLCCAIAFIEKLDAQSLNLNPEEFKLYMSDQASPDRPQAPGISCPSSSSSRSGPRADRP
ENDLIDWGDGVEASVQDVLEGLQLDSCAPSTSAIDSDNVDSEGLPPPLQPQVFAG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagaactgaacatcgaggaatctacgtggatcaggcagccctgctctgcagt
aaaggctgtgatttttatggcaattcaacctggggaggtctgtgttccaaatgttggcgc
gaggagaaccagaaggcacgagccaagcagatagaggaggaccacgcactagcagagaga
ctgcaaagagaagaagaggcagcctgtgcgggtagcaaccagggggcgcactcagggaac
tcgtccacccggctgagcaaaccggaagagaaaaggaatagtcaaaaatcacgcactgtc
cccacaggaaagaaatttttcaccacacttgcgaagacaaccctagggagagatgtcaat
gttcccagccagccagctcccaccacctccatcagccagcagcctgttgcagactcagac
caagccacaagacagttcatcgatttcctgaagaccctgcaaaagcctggccgggatatt
ttcaaacagtgtcattctttctgttatagtgtatcttacaagaaggatcttggtgcagag
gatctttcagaatctgtgcaagacttttaccagaacttgtctgaccgcttacacaatgtc
tacaaagggagtccagagcgagtagaggcaataatggatgaagtggagaggtacataacg
ctgcagttgtatgaacaggctttctgtcctgaatccgcagatgatgaggtcaaagacttg
gccatccagaagagaatcagggctttgcactgggttacggttcagatgctgtgtgcccca
ctaaaagaggagatccctgcagtgtcagacagtctggacaaggccattactgatataatt
gagatggactccaagcgtgtgcccaaggataagctgagttatgtcaccaggtgcagcaag
cacattttcagtgcaataaagcgcagcaagagagaggccgcgtcggctgacgacttcctc
ccagcgctcatatatgtggtgctgagggccaacccaccccggctgcagtcgaacatccag
tatatcacgcgcttctgcaaccccagacgcctcatgagcggcgaggacggatattacttc
accaacctgtgctgtgcaatagctttcatagaaaagctggatgctcagtctctaaacctg
aatccagaggaatttaaactctacatgtctgaccaggcttcccctgacaggccccaggcc
cctggaatctcttgtccctcatcctcttcatcacggagtggccccagagcggacaggcca
gagaatgacctcatcgactggggagatggagtggaggcctctgttcaggatgtcctggaa
gggcttcaactggactcttgcgctccatccacttctgcaatcgactcagacaatgtagac
agtgaggggctaccgcctcctctacagcctcaggtttttgctgggtag
DBGET
integrated database retrieval system
