KEGG   Pangasianodon hypophthalmus (striped catfish): 113543138
Entry
113543138         CDS       T05759                                 
Name
(RefSeq) serine/arginine-rich splicing factor 7-like
  KO
K12896  serine/arginine-rich splicing factor 7
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03040  Spliceosome
phyp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113543138
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    113543138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:phyp03041]
    113543138
Spliceosome [BR:phyp03041]
 Common components
  Common spliceosomal components
   SR proteins
    113543138
SSDB
Motif
Pfam: RRM_1 RRM_5 zf-CCHC_3 zf-CCHC zf-CCHC_5
Other DBs
NCBI-GeneID: 113543138
NCBI-ProteinID: XP_026796995
LinkDB
Position
Unknown
AA seq 241 aa
MSYYSSSSSRSSSRNLECKVYVGDLGGGAAKGEIERAFGYYGPLRSVWVARNPPGFAFVE
YEDARDAEDAVKGMDGKLLGGSRIRVELSTGMSRKSRYGRASRRPFDPNDRCYQCGDRGH
YAYDCYRFSKRGRRSRSRSRSRSRSRSRRNRSRSRSRSYNRRYRSPSYSKRRSRSGTPAR
SKSRTPVRSRSRSRSRSGSASRSRSRSRSRSRSLKRRSHSRSPSPKKSPTSPDEDRVEKN
P
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtcgtactactcatcttcatcatctcgcagttcctccagaaacttggagtgtaaggtg
tatgtgggagatctgggaggaggagctgctaaaggagaaatcgaaagggccttcggctat
tatggccctttgcgcagcgtttgggtggccaggaaccctcctggttttgcttttgtggaa
tacgaagatgcccgggatgcagaggatgcagtgaaaggaatggatggaaagctactgggt
ggatcgcgtattcgcgtggagctgtccactggcatgtctaggaagagccgatatggccga
gccagtcgccgtccatttgatccaaatgatagatgctatcagtgtggagacaggggacac
tatgcctacgactgctaccgcttcagcaagcgaggacgtcgaagcagatcccggtctcga
tctcgctccaggtcaaggagccgccgcaaccgttcacgatctcgaagccgcagctataac
cggaggtaccgttctccatcttattcaaaacgcaggagcaggtctggcactccagctcgc
tcaaaatcaaggactcctgttcggagtcgctctcggtctcgctctcgatctggatctgct
tcgcgctctcgctccagatctaggtcccgctctcgcagccttaagaggcgcagccattcc
aggtcccccagcccgaaaaaaagccccacatcccctgatgaagatcgagtggagaagaat
ccctaa

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