KEGG   Pangasianodon hypophthalmus (striped catfish): 113543170
Entry
113543170         CDS       T05759                                 
Symbol
cul3
Name
(RefSeq) cullin-3 isoform X1
  KO
K03869  cullin 3
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04120  Ubiquitin mediated proteolysis
phyp04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113543170 (cul3)
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    113543170 (cul3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phyp04121]
    113543170 (cul3)
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113543170 (cul3)
Ubiquitin system [BR:phyp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Cullin
     113543170 (cul3)
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     113543170 (cul3)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF6655 Stu2_CTS
Other DBs
NCBI-GeneID: 113543170
NCBI-ProteinID: XP_026797037
LinkDB
Position
Unknown
AA seq 773 aa
MSNLSKGGTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLIYKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYK
LFSRVPNGLKTMCECMSAYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRFDRFLQESFN
NDRLFKQTIAGDFEYFLNLNPRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLA
KHSGRQLTLQHHMGSADLNATFYGPIKKVSVSALEDGSEVGVGGAQVTGSNTRKHILQVS
TFQMTILMLFNNREKFTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIEN
GHVFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRK
KMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgtcaaatctgagcaaaggcggcaccaaaaaggacaccaagatgaggatacgcgctttt
cctatgaccatggacgagaagtacgtcaacaacatctgggacctcctcaagaacgccatt
caggagatccagaggaagaacaacagtgggctgagcttcgaggagctgtacaggaacgcc
tacaccatggtgctgcacaaacacggcgagaagctatacacaggactgcgcgaagtcgtc
accgagcacctcatctacaaagtacgggaagatgttttaaattcactgaacaacaacttc
cttcaaacgttgaaccaagcctggaacgaccaccagacagccatggtgatgatccgagat
attttgatgtacatggatcgagtgtatgtgcaacagaacaacgtggagaacgtctataat
ctagggctcatcatattccgggaccaggtggtccgctacgggtgtatccgggaccacctc
aggcagacgctgctagacatgatcgcccgggagaggaaaggcgaagtggtggatcggggt
gccatacgtaatgcctgccagatgctgatgatcttaggccttgaaggaaggtcggtctat
gaggaggactttgaagccccgtttttagaaatgtctgcagaatttttccagatggaaagt
caaaagtttttggcagagaacagcgcgagtgtgtacataaagaaggtggaggcgcggata
aacgaggagattgagcgagtgatgcactgtctggataagtcaacggaggagcccatcgtg
aaggtggtggagcgagagctcatctcaaagcacatgaagaccatcgtggagatggagaac
tcggggctagtccacatgctgaagaatggaaagacagaagacctggcgtgtatgtataag
ctgttcagtcgggtgccaaatggtctgaagacaatgtgtgagtgtatgagcgcctacctg
agagagcagggcaaagctctggtgtctgaagagggagagggcaagaacccagtggactac
atccagggcttgctggacctgaagtctcgctttgaccgcttcctgcaggagtcctttaat
aatgatcgtttgttcaagcagactattgcaggtgactttgaatacttccttaacttgaat
ccccggtcacctgagtacctctccctcttcatcgatgacaagctaaagaagggcgtgaaa
gggttgacggagcaagaggtggagtcaatcctggataaagcgatggtgctgttcaggttc
atgcaggagaaggatgtatttgagcgctactacaaacaacacctggccaggaggctccta
accaataaaagcgtctctgacgattcagaaaagaacatgatctcaaagctgaagacggag
tgtggctgtcagttcacatccaaactggaaggcatgttcagggacatgagcatctcaaac
acaaccatggatgagtttcgccaacacctacaatcaacaggggtgtctttgggtggtgtt
gacctcacggtcagggtgttaacgacaggttactggcccactcagtcagccacacccaaa
tgcaacatccccccttctcccagacatgcatttgaggtttttagaaggttttatttggcc
aagcacagtggccggcagctcacactgcagcaccacatgggctcggcagacctcaatgct
actttctacgggccgatcaaaaaggtatcagtgtcagcgctagaggacggctcagaagtg
ggcgtgggtggtgcccaggtgacgggctccaacaccaggaagcacattctccaagtgtcc
acttttcagatgaccatccttatgctcttcaacaacagagagaagttcacctttgaggag
atccagcaggagacggacatcccagagcgagagctggtgcgagcgctgcagtctttggcc
tgtgggaagcccactcagcgagtgctcaccaaggagcccaaatctaaggagattgagaac
ggccatgtatttacagtcaacgaccagttcacctccaaactgcacagagtaaagatccag
acagttgctgctaaacagggtgaatcagaccctgagaggaaagagacacggcagaaagtg
gatgacgacaggaagcacgagatcgaagcggccatcgttcgcatcatgaagtccaggaag
aagatgcagcacaatgtgctagtagcagaggtcactcagcagttacgggcacgattcctc
ccaagtcctgtggtcattaaaaaacgcatcgaaggacttattgagcgggaatacttggca
agaacgccagaagaccgcaaagtgtacacttacgtagcataa

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