Pangasianodon hypophthalmus (striped catfish): 113543265
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Entry
113543265 CDS
T05759
Symbol
atg5
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04136
Autophagy - other
phyp04140
Autophagy - animal
phyp04216
Ferroptosis
phyp04621
NOD-like receptor signaling pathway
phyp04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113543265 (atg5)
04136 Autophagy - other
113543265 (atg5)
09143 Cell growth and death
04216 Ferroptosis
113543265 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
113543265 (atg5)
04622 RIG-I-like receptor signaling pathway
113543265 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113543265 (atg5)
03029 Mitochondrial biogenesis [BR:
phyp03029
]
113543265 (atg5)
Membrane trafficking [BR:
phyp04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
113543265 (atg5)
Mitochondrial biogenesis [BR:
phyp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
113543265 (atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF6782
Motif
Other DBs
NCBI-GeneID:
113543265
NCBI-ProteinID:
XP_026797168
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MADDKDVLRDVWFGRIPACFTLYPDEVTEREAEPFYLLLPRVSYLTLVTDKVKKHFLKVV
KAEDVEEMWFEYEGTPLKWHYPIGVLFDLHASNTALPWNITVHFKHFPDRDLLRCSSSAV
IEAHFMSTIKEADAFKHKGQVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEEG
GFRYIPFRIYQTLSDRPFIQKLFRPVSSEGHALTLGDLLKEMFPAAMCQDDDPKKYQVVI
HGIEPLFETPIQWLSEHLSHPDNFLHICIVPAPSD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaagatgtacttcgagatgtgtggtttggccggataccggcgtgcttc
acgctttatccagatgaagtcacagagagagaagccgaaccattttatcttctccttccg
agggtcagttatctgacgctagtgaccgacaaggtcaagaagcactttctgaaagtcgta
aaagccgaagatgtagaggaaatgtggtttgaatatgaaggcacacctctgaaatggcac
tatccaatcggagtattattcgatcttcatgcttcaaatacggctctcccctggaatatc
actgtgcactttaagcattttcctgatcgggacttgctccgctgctcctcgagcgctgtg
atagaagcccattttatgtccaccattaaagaagcagacgcatttaagcacaagggccag
gtcatcaatgacatgcagaaaaaagatcacaagcagctgtggatgggcctgcagaacgat
aaatttgaccagttctgggccatgaaccgcaaactgatggaatatccaaccgaagagggc
ggctttcgctatattcctttcagaatataccagacgctgagcgacaggccgttcatccag
aagctgttccggcctgtttcttccgaaggccacgctctcaccctgggagatctgctcaaa
gagatgttccctgctgccatgtgccaggatgatgatccaaagaaataccaagtggtgatt
cacggcattgaaccgctgttcgagacgcccatccagtggctcagtgagcacctgagccat
ccagacaacttcctccacatctgcatcgtcccggcgccgagcgactga
DBGET
integrated database retrieval system
