Pangasianodon hypophthalmus (striped catfish): 113543288
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Entry
113543288 CDS
T05759
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03420
Nucleotide excision repair
phyp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113543288 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
113543288 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
phyp03051
]
113543288 (rad23b)
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113543288 (rad23b)
Proteasome [BR:
phyp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
113543288 (rad23b)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
113543288 (rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
PARM
UBA_3
Dsc3_N
CUE
Ubiquitin_5
RAP1
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
113543288
NCBI-ProteinID:
XP_026797196
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDAEETVKALKEKIENEKGKESFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVAKPKAAPAAAQSSTTAASSSSSASSTTTPTIPPAAAAAAATTTTTT
TDTTSESSVKEEKAAEEKPPSSTPASSGSLTNVNIFDEATSALVTGQSYENMVTEIMLMG
YEREQVVAALRASFNNPDRAVEYLLTGIPVESEGNVGGSDPAAPVGGAPAAPTGLSSPSS
TTPTQPTAGSAANPLEFLRNQPQFLQMRQIIQQNPSLLPALLQQIGRENPQLLQQISSHQ
EQFIQMLNEPAQEAGQGGGGGVPEAGGGHMNYIQVTPQEKEAIERLKALGFPEGLVIQAY
FACEKNENLAANFLLQQNFDDD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacactgaaaaccctgcagcagcagacgtttaaaatcgacatcgacgcggag
gagacggtaaaggcgctaaaggagaaaattgagaatgagaaagggaaggagagttttcct
gtcgctggacagaagctgatctatgcaggtaaaatcctaaatgatgacaccgcactgaag
gagtataagatagatgagaagaactttgtggttgtcatggtagcaaagcctaaagctgct
cctgcagccgctcaatcttcaactactgcagcatcatcgagtagttccgcctctagcact
acaactcccacaatccccccggctgcagctgctgccgccgcaaccaccaccaccaccacc
actgacaccacatccgaaagcagcgtcaaagaggagaaagcagcagaggaaaaaccgcca
tcttctacacctgccagttctggtagcctgacgaacgtcaacatattcgacgaggcaact
tctgctctggtgacgggacagtcgtatgagaacatggtgactgagatcatgttaatgggc
tatgagagggagcaggtggtggcggctctgcgtgccagtttcaacaacccagaccgagct
gtcgagtacctgctcacgggaattccagtggagagtgaagggaacgtggggggatctgat
cctgcagctccagtagggggcgcaccagctgctcccacaggactctcatctccatccagc
acaacacctacacaacccactgctggatcagcagctaatcctctggagtttctgaggaat
cagcctcagttcctgcagatgaggcagatcatccaacagaacccctcattgctgcctgcc
ctgctgcaacagatcggccgagagaacccccagttactgcagcaaatcagcagccaccag
gagcagtttattcaaatgctgaatgaaccggcacaggaagcagggcaaggagggggaggg
ggtgtgcctgaggctggtggtgggcacatgaactacatccaggtcacaccccaggaaaag
gaagcaattgagaggctaaaggcacttggattcccagaaggacttgttattcaggcctac
ttcgcttgtgagaagaacgagaacctggctgccaatttccttttacaacagaacttcgat
gatgactaa
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integrated database retrieval system
