Pangasianodon hypophthalmus (striped catfish): 113543302
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Entry
113543302 CDS
T05759
Name
(RefSeq) Down syndrome cell adhesion molecule-like
KO
K06767
Down syndrome cell adhesion molecule
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113543302
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
DSCAM family
113543302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
V-set_CD47
C1-set
Sp38
Interfer-bind
fn3_2
DUF6377
DUF4446
DUF6249
Motif
Other DBs
NCBI-GeneID:
113543302
NCBI-ProteinID:
XP_026797211
LinkDB
All DBs
Position
Unknown
AA seq
2020 aa
AA seq
DB search
MWIFAFLFLQSISNVFGEDLHSSLYFVNASLQEVVFSSTTGALVPCPAAAVPPATLRWYL
ATGEEIYDVPGIRHVHPNGTLQIYGFLPSSFSNLINDNTYYCTAENPSGKIRSQDLHIKA
VFREPYTVRVADQRVMRGNTAVFKCIIPASVEEYVTVVSWEKDTVSLVSGSRFLVTSTGA
LYILDVQSEDAVNIYRCTTRHRYTGETRQSNSARLLLSEPVDSAPVILDGFERKEVMVGH
RVELPCKASGHPPPRYRWLKDNSPLESDSRYHQSVSGLLIEATRPSDGGNYVCEVWNSFG
NAKVVGRLVVKQPLKAVVSPRKVRGSVGSQVSLFCSVTGSDEYEITWYRNGERIQPGPNV
RITGLSHENLVMEGMAKSDGGAYQCFARNGKMSTQDFVQVILEDGTPKILSAFSEKVVSP
NEPISLVCHVKGTPLPSVTWTLDDEPVIKDSHHRMDRFVTVEGHVLSYLNVSHTQVTDGG
VYRCTCNNSAGSVSYQARINVRGPASIRPMKNLTAIAGRDMFIHCRIIGYPYYSIKWYKD
SNLLPFNHRQRAFENNGTLKLSNVQNSDEGEYTCYVLVDPEKQIHRSVHVTVKVPPLIQH
SDSQSASIGQRVFIPCVVTSGDLPMSITWHKDGKPINASLGVTIDNIDFTSSLRISNLSE
IHNGSYTCIARNEAAAVEHSIQLIVKVPPHFEVQPRDQDGIYGKSVILNCSAKGNPIPTI
VWKHSKGAGVPQFQPIALNSGSRVQLLERGSLLIKHVLEEDSGYYLCKVSNDVGADISKS
MYLTVKIPAMITSYPNTTRAEQGHMTEMSCTAHGEKPIKVRWEKESHIINPDINRYVVSV
KEVADEVISTLQILHTVREDSGFYSCIAINSYGEDKGIIQLIVQDRPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDINYKNKSASWALSQTTKDVSPQLNQATIIELHPASTYNIR
MFAKNQIGESRPSNELTITTDEAPPDGAPQDVQLEAISSQSIKVTWKAPHKHLQNGLIRS
YQVCYREYGTGGSAQYNTINLDTTGDIETITLDNLKKYTQYEVRVQAANRAGMGPTSEEA
IITTLEDVPSRPPENVVTTATTPETISLSWAPLPKEALNGMLLGYRVIYWANLPDGELGE
IKNITTTKPSLELEGLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVKAAA
ASASVVFVSWLPPLKLNGIIRKYTVFCSNPYPTVISEFEAAPDVYFRRVTNLNQNWQYSI
WVVAVTAAGRGNASEIITVEPQAKAPARILTFSGTVTTPWMRDIVLPCRAVGDPPPTIKW
LKGNNGTPAPVSIDGRRSVHGNGSFVIRTVKAEDSGYYTCIVSNNWGSDEITLNLQVQVP
PDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEEWGSFPISPSERSYRLE
NMKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKDHELFSSINSTRVELNLIGW
NNGGCPISSFTLEYRPVDTTPWTTMQRTSLPKSHVLYDLQEGTWYELQMRVGNSAGTAEK
RVLFATLNVDGSTIAPLLKIVDPSQENRQGTEGLKMMVTIICILVAIAMVFIVLLVMRRR
RREQRLKRLRDAKSLAEMLMSKNTRTPDAVNKQQQTLRMHIDIPRAQLLIEERDTMETID
DRSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQTTGPLVDVSDARPGTNPTARRTAKAG
PATRSRYASQWTLNRPHQPMSSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARS
SMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTDSMT
SSTPSESGICRFTASPPKPQDASRVMNMAVPKAHRPGGELVHLPPYLRMDFLLNRGAAHS
GREATGQTCLEPQRSRTAKRPAVLAPTPSETPSTAPASSGPPSREAVQQWQPGSASTLPH
REPGDLAQAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgtggatatttgcatttctctttctccagagcatctcaaatgtttttggtgaagatcta
cattccagcttatattttgtcaatgcatctctgcaagaggtagtgttctccagcactaca
ggggcactggtgccgtgtccggcagcggccgtgccccccgctacgctgcgctggtacctg
gccactggggaggagatctacgatgtgccaggcatccgacacgtgcacccgaatggcaca
ctgcaaatctacggcttcctcccctccagctttagtaacctaatcaatgacaacacctac
tattgcacagcagagaatccgtcagggaagatcaggagccaagacttgcacatcaaggct
gtatttcgggaaccgtacactgtccgtgtggcggaccaaagagtcatgagaggcaataca
gcggtcttcaagtgcattatcccagcctcggtagaggagtacgtcactgttgtatcatgg
gagaaagacactgtctcacttgtctcaggatcaagatttctcgttacatccacaggggcc
ttgtatattctggacgtgcagtcagaggatgcagtgaacatctaccgctgcactacgcgg
catcgctacacaggagagacaagacaaagtaacagtgcccgattacttttatcagaacct
gtggattcagctccagtgattctggatggctttgagaggaaggaggtcatggtcggtcat
cgggtcgagctgccctgtaaggcttcgggtcatcctccgcctcggtaccgctggctaaag
gacaacagccctctggagtcagacagtcgctaccaccagagtgtctcaggcctcctgatt
gaggccacccgacccagtgatggaggcaactatgtgtgtgaagtctggaatagctttggc
aatgccaaggtggtgggacggttggtggtcaaacagcccctgaaagcagtggtgagtcct
cgtaaggtgagaggcagtgtgggcagtcaggtctctctgttctgcagtgtcactggctct
gatgaatatgaaatcacctggtacagaaatggtgagaggatccagccagggcccaatgtc
cgcatcactggcctcagccatgagaacctggtgatggagggcatggccaagagtgatgga
ggagcctaccagtgttttgcacgcaatggcaagatgtccacccaggattttgtgcaggtc
attctggaggatggaacgccgaagatcttgtcagctttcagcgagaaggtggtgagcccc
aacgagccaatctccctggtgtgtcacgtcaaaggcaccccactccccagcgtgacatgg
acactggatgatgagccggtcatcaaggacagccaccaccgcatggatcgctttgtcacg
gtcgagggccacgtgctcagctacctgaacgtctcacatacgcaggtcaccgacggcggc
gtctaccgttgcacctgcaacaactctgccggatcggtctcctaccaggcgcgaataaac
gtaagaggtcctgccagtatccgcccaatgaaaaacctcactgccatcgcggggcgggac
atgttcattcactgccgcatcattggctacccctactactccatcaagtggtacaaagat
tccaacttactcccgtttaaccatcgccagcgtgcctttgagaacaatggcacattgaag
ctgtctaatgtgcagaactcagatgagggcgagtacacgtgttacgttctggtggatcct
gagaaacagatccataggagcgtccatgttactgtaaaagttccgcctctgatccagcac
tcagactcccaaagcgcctccataggtcagagagtcttcatcccctgtgtggtgacctcc
ggcgacctgcccatgtccattacctggcacaaagacggcaagccgatcaacgccagctta
ggagtcactatcgacaatatcgacttcaccagctcactgcgcatctccaacctgtctgag
atccacaacgggagctatacctgtatcgcccgcaatgaggcagctgctgtggagcacagc
attcagcttattgttaaagtccccccacattttgaggtgcaacctcgggatcaagatgga
atctacgggaaatctgttattttgaactgctcggctaaaggaaacccgattcctacaatt
gtgtggaaacattctaaaggagcgggagttcctcagttccagcccattgcgctgaactcg
ggatctcgtgtgcagttgctggagagaggctcactgctcatcaaacacgtgctggaggag
gacagtggctactacctgtgcaaggtcagcaacgacgtgggcgctgacatcagcaagagc
atgtacctcaccgtcaaaattcctgccatgatcacatcctatcctaacaccactcgagca
gaacaaggtcacatgacagagatgagttgcacagcacatggtgaaaagcccatcaaggtg
cgctgggagaaggaatcccacatcatcaaccctgacataaaccgctacgtggtgagcgtc
aaggaagtggctgatgaggtcatttccaccttacagatcttgcacacagtcagagaggat
tctgggttttattcctgcattgccattaactcttacggtgaagacaagggaattattcag
cttatagtacaagatcgtccggaccctcccgaagtagaaatcagagaggtgaaagatcga
accattgcgcttcgctggacaatgggatttgatggcaacagtccgatcacaggatatgac
atcaactacaagaacaaatcagcctcctgggcattgtcccaaaccaccaaagacgtctca
ccccagctgaaccaggccaccatcatcgagttgcaccctgcctccacctataacatccgc
atgtttgctaagaaccagattggagagagccggcccagtaacgagctcaccatcactaca
gacgaagcccctcctgatggtgcgccccaggatgtgcagcttgaagcaatatcatcccag
agcattaaagtcacatggaaggctccccacaagcatcttcagaatggtttgatccggagc
tatcaggtgtgctatagggaatatggtacaggaggaagcgcccagtacaacaccatcaat
ctggacacaacaggcgacatcgagaccatcactctggacaacctgaagaagtacacacag
tatgaggtgcgcgtgcaggctgccaatcgcgcaggaatggggcccacatctgaggaagcc
atcatcaccactctggaagacgttccaagccgaccacctgaaaacgttgtgaccacagcc
acaaccccagagaccatctctctgtcctgggctcctctcccaaaagaggcactgaacggc
atgcttcttggctaccgagtcatttactgggccaacttaccagacggagagctgggtgag
atcaagaacatcactaccacaaagccctctctggaacttgaaggattggagaaatacacc
aactacagcatccaagtgctggccttcacccgggctggggacggagttcgcagcgagcaa
atatacacaaggaccaaagaggacgttccaggtcctccagctggtgtgaaggctgctgct
gcgtctgcctcagtggtgttcgtctcctggcttcctccactgaaactcaacggaatcatc
cggaaatacacagtcttctgctccaacccttatcccacggtcatcagtgagtttgaggct
gcacccgatgtgtattttcgtcgagtgaccaacctgaaccagaactggcagtacagtatt
tgggtggtggcagtgactgcagctggtcgagggaacgcgagtgagatcatcactgtggag
ccacaagctaaagctcctgctcgtattctaacattcagtggcacagtgaccacaccatgg
atgagggacattgtactaccctgtagagctgttggagaccctcctccaaccatcaagtgg
ctgaagggaaacaacgggacacccgctcctgtctctattgatggccggcgcagtgtccat
ggcaacggcagctttgtgatccgcacagtgaaagctgaggattctgggtactacacctgc
attgtgagcaacaactggggttcggatgaaatcacgctaaatctacaggttcaagtacct
ccggaccagccacgtctcactgtaactaaaaccaccaccacatccatcactctgtcctgg
attcctggagacaacggaggaagctcgatcagaggttacattctgcagtactcagaggat
aacagtgaggaatggggcagctttcccatcagccccagtgaacgatcataccggctggag
aatatgaagtgtggcacctggtacaagtttaccctgactgcgcagaatgctgtgggtccg
ggccgcattagtgagatcatcgaggccaaaacccatggaaaagaaccacagtttgccaaa
gaccatgagcttttctccagcatcaactcaacacgcgtggagcttaatctgattggctgg
aataacggcggctgtccgatcagctcgttcacgctggagtaccggccagtggacaccaca
ccatggaccacaatgcagcgcacctctttacccaagagccacgtgctgtatgacctgcag
gagggcacgtggtacgagctgcagatgagggtgggcaacagcgcgggtacagctgagaag
agggtgttgtttgcaacactgaatgtagacggcagcactattgctccactgctgaagatt
gtggaccccagccaggagaacaggcaaggcactgagggcctgaagatgatggtgaccatc
atctgcatcctggtggccattgcaatggttttcattgtgctgcttgttatgaggagaagg
aggagggaacagaggctcaagagattacgggatgcaaaaagcttggcagaaatgcttatg
agtaagaacacacgaactccggatgctgtaaacaagcaacagcaaaccctccgaatgcac
attgatatcccacgagcccaactgctcattgaggagagagacacaatggagacgatagat
gaccgatcaacagtgctgttgacagataatgattttggagagacgtctaagcagaagtcc
tccacagtcacacacacggttcactaccagtcactgtcccagacaactggcccactggtg
gatgtctcagacgctcgacctggtacaaatcccactgcccgtcgtacagctaaagcgggt
ccagcaacacggagccgctatgccagccagtggacgttaaacagacctcatcagcccatg
tcctcacacacactcactacagattggaggctgcccacaccacgtgccacaggctcagtg
gacaaggaaagtgacagctacagtgtcagtccctctcaggacacagaccgtgctcgaagc
agcatggtgtccacagagagtgcttcctctacatatgaggaactcgcccgagcatatgag
cacgccaagatggaagaacagctgcgccacgccaagttcaccatcacagagtgcttcatc
tctgacacatcctctgagcagatgacagccggcaccaacgactacacagacagtatgaca
tccagcacgccctctgagtcgggcatctgccgcttcaccgcctctccaccaaaaccacag
gatgccagccgggtcatgaacatggccgtgcccaaagcacacagacctgggggtgaactg
gtccacctgcctccttacctgcgtatggacttcctgctgaaccggggagcggctcattcg
ggcagggaagccacgggtcagacgtgtctggagccccagagaagtcgcacagcaaagcgg
ccggccgtgttagccccaacgccctccgagacgccttccactgcacctgcctcttccggc
ccacccagcagggaagcggtgcagcagtggcagccaggctcagcctccacgctgccccac
cgcgagcccggggacctcgcccaggccgccaaactcagcagctcccaggaatcactgtta
gactctagaggacacctgaaacagagcaacaacccatacgcaaagtcctatacactggta
taa
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